Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g2853 | ATGGCAGAGAGCCTTCGCTTGGTTGTTGCTGTTCTTGGCAATGCAGCCTCAGTTTCCCTTTATGCTGCTCCAATGGTCACCTTTAAAAGAGTTATAAGGAAGAAAAGCACAGAGGAGTTTTCATGCATTCCTTACATCATCGGACTGTTGAACTGTCTCCTTTTCACTTGGTACGGTTTGCCCATTAAAAAAGTTATACAAACCAAGAGTGTGGAATTCATGCCACTTCCGTTATCTTTGTGCTCGTTCTTAGCTACTGTGCTCTGGCTGATTTATGGACTTCTCAAGCGTGATATATTCGTTGCGGGGCCTAGTGCGATTGGAACTCCCTTGGGGATCCTGCAGCTTGTCCTTTACTGTAAATACCGAAAAGGGAGTGCTGTGGAAGAACCAAACAAAGGGGACCCGGAGAAGGGCAACTTAGAGAAGGTGGACATGGAAATGGGAAAAGTTGAAACGAGTGTCACAAATCACATGAACGGCAACTCATGA | 492 | 0.4533 | MAESLRLVVAVLGNAASVSLYAAPMVTFKRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGLPIKKVIQTKSVEFMPLPLSLCSFLATVLWLIYGLLKRDIFVAGPSAIGTPLGILQLVLYCKYRKGSAVEEPNKGDPEKGNLEKVDMEMGKVETSVTNHMNGNS | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g2853 | 163 | Gene3D | - | 10 | 62 | - | - | |
| Ssu1g2853 | 163 | PANTHER | BIDIRECTIONAL SUGAR TRANSPORTER SWEET | 4 | 62 | - | - | |
| Ssu1g2853 | 163 | Pfam | Sugar efflux transporter for intercellular exchange | 62 | 124 | IPR004316 | GO:0016021 | |
| Ssu1g2853 | 163 | PANTHER | BIDIRECTIONAL SUGAR TRANSPORTER SWEET | 62 | 161 | - | - | |
| Ssu1g2853 | 163 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 62 | 161 | - | - | |
| Ssu1g2853 | 163 | Gene3D | - | 63 | 132 | - | - | |
| Ssu1g2853 | 163 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 4 | 62 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu1g2853 | Ssu-Chr1 | 75534572 | 75536290 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu1g2853 | 1 | 62 | Miscellaneous Gene Families | AT5G53190 | 64.516 | 2.98e-25 | 95.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu1g2853 | K15382 | - | gmx:100813119 | 188.348 |