Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2673 ATGGCTTCTGAAGATGTATTTATTGATGAAATCGCTTATCCATCCAAGATCACTACCACCAAGCCCCTATCTCTGTTGGGTCAAGGAATCACCGACATGGAGATCCACTTCATCCACGTGAAATTCTATTCAATCGGGGTTTATTTGGACACTGAAGTAGTAAGCCACTTGCAGCAGTTTAAAGGAAAACCTGCAAAGGAGCTGGAAGAGAATGACGAGTTCTTTGATGCTCTCATTTCTGcTCCAGTGGAGAAGTTTATTAGACTTGTGGTGATCAAAGAGATCAAGGGTGCACAGTATGGGGTTCAGATTGAGAGTGCTGTGAGGGATAGGTTGGCAGCTGATGACAAATatgaggaggaagaagaagaagctttggaaaaagttattgaattttTCCAGTCCAAGTACTTCAAGAAACATTCAGTGATCACATACCATTTCCCAGCAAATTCTGCAACTGCTGAGATTGTGGTATCTTTGGAGGGGAAAGAAGACTCCAAGTTTGTGGTAGAGAATGCCAATGTGGTAGAGGCCGTCAAGAAATGGTACCTTGGTGGCTCGAGGGCGGTGTCTACCACAACCATTTCATCTCTGGCTAGCAGTCTCTCGGGGGAGTTGTCCAAGTGA 630 0.4206 MASEDVFIDEIAYPSKITTTKPLSLLGQGITDMEIHFIHVKFYSIGVYLDTEVVSHLQQFKGKPAKELEENDEFFDALISAPVEKFIRLVVIKEIKGAQYGVQIESAVRDRLAADDKYEEEEEEALEKVIEFFQSKYFKKHSVITYHFPANSATAEIVVSLEGKEDSKFVVENANVVEAVKKWYLGGSRAVSTTTISSLASSLSGELSK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2673 209 Gene3D - 53 204 IPR016089 -
Ssu1g2673 209 PANTHER CHALCONE--FLAVONONE ISOMERASE 3-RELATED 1 209 IPR044191 -
Ssu1g2673 209 SUPERFAMILY Chalcone isomerase 6 208 IPR036298 GO:0016872
Ssu1g2673 209 Pfam Chalcone-flavanone isomerase 12 204 IPR016087 GO:0016872
Ssu1g2673 209 Coils Coil 104 124 - -
Ssu1g2673 209 Gene3D - 13 184 IPR016088 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2673 K01859 - gmx:778027 330.102