Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2660 ATGTTATTCACTCTCACTTATGTTTGTCAACCCCTATCGTCATCTTGTTCTTATTTTCCACGTAACCCCTCCTCTCGAATTAAGTGTGACGGTGCTAAAGTTCCCGTCTTTGTGCCGAAACCCCGCGAAAGTGGTTACCACATTGAAAGGGGTTTGGAGTTTAGCACCGGAGACGCGTTTTTCCGGCAAGAGAGCGCCACCGGCCGCGACCTCGGCGTTTTGGCAGCCTCGCTGCACAAGAAGGATAACGGAAGGTTGCGAGTGCTTGATGCGTTGTGTGGGTGCGGAATTCGGTCGCTCCGGTACTTGGCGGAGGCGGAGGCCGATTTTGTAGCGGCGAATGATGGGAATGAGGAGTACGGAAGCACCATTGTGGAGAATTTGTCGAGGGTTTCAGGGGAAGAGGAGGGGAGGTGGGTGGTTACTCATTTGGAAGCTAATAGGGTTATGATGGATTATTATCTGCAGAAGagtttctttgattttattgaTGTGGATTCTTTTGGGAGCGACTCTTCTTTCTTGAGGTCTGCCATTAGTACTTTGAAATTAGGCGGCTTGCTCTATGTTACTTCGACTGATGGCTTCTCTTCTGGTGGACACCGTCCTCATCATTCTTTAGCTGCATATGGAGCTTATGTGCGCCCTATGCCGTATTCGAATGAGGTTGGTTTGCGAATGCTTATAGGTGGGGTTGCCAGGGAGGCTGCAGTGTTGGGGTATCAtatcactcccttgttttcgtACTATGCTTTTCATGGACCTGTTTTTCGAGTCTTGCTCAGATTGAATCGTGGGAAGATTCATGACAGTAGGCATTATGGTTATATCGGCTATTGCCACCAGTGTGGAAATTCCCATGAATTTTATTGGAATCAACTTGGTCAGATCAGTTGCTCCTGCAGTACGCCAAAGGTTTCAAACTCCCTTGTGGTGTCAGGACCTCTTTGGACTGGACCTCTTCATGATGCTGCCTATCTTGCGGACATGTTAAATCTGGCCAAGCAGTGGGGATGGATAGGCTGTGACGGTAAAGACAGCCTTGAAAAGCTTATAAAACTGATGGTGGATGAAAGTGACCCCAAGTTGCCATTTGGGTATATCAAGTTGGATGAGATGGCAAGCCGTGCAAAAATCAATTCTCCACCTCTGAAGGCCTTGATGAGCGCCATGCACCAGAAGGGTTATGCTGCCAGCAGGTCTCACATAGAAACAAATGCAATTAAGACAAATTGCCCCATGACAGAATGCATTAAGATTGCCAAAGAACTACTGCAGGTTTCTATCGCTGAATGA 1296 0.466 MLFTLTYVCQPLSSSCSYFPRNPSSRIKCDGAKVPVFVPKPRESGYHIERGLEFSTGDAFFRQESATGRDLGVLAASLHKKDNGRLRVLDALCGCGIRSLRYLAEAEADFVAANDGNEEYGSTIVENLSRVSGEEEGRWVVTHLEANRVMMDYYLQKSFFDFIDVDSFGSDSSFLRSAISTLKLGGLLYVTSTDGFSSGGHRPHHSLAAYGAYVRPMPYSNEVGLRMLIGGVAREAAVLGYHITPLFSYYAFHGPVFRVLLRLNRGKIHDSRHYGYIGYCHQCGNSHEFYWNQLGQISCSCSTPKVSNSLVVSGPLWTGPLHDAAYLADMLNLAKQWGWIGCDGKDSLEKLIKLMVDESDPKLPFGYIKLDEMASRAKINSPPLKALMSAMHQKGYAASRSHIETNAIKTNCPMTECIKIAKELLQVSIAE 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2660 431 ProSiteProfiles Trm1 methyltransferase domain profile. 27 421 IPR002905 GO:0003723|GO:0004809|GO:0008033
Ssu1g2660 431 PANTHER TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE 38 426 - -
Ssu1g2660 431 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 59 420 IPR002905 GO:0003723|GO:0004809|GO:0008033
Ssu1g2660 431 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 38 426 IPR002905 GO:0003723|GO:0004809|GO:0008033
Ssu1g2660 431 CDD AdoMet_MTases 87 191 - -
Ssu1g2660 431 Gene3D Vaccinia Virus protein VP39 32 360 IPR029063 -
Ssu1g2660 431 Gene3D - 364 424 IPR042296 -
Ssu1g2660 431 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 422 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2660 K00555 - gmx:100788340 801.971