Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2646 ATGCTTGGGATATGGTTACTAATTATAATTCCTAGCAACTTCTGGGCAGTGGAAGTAACCGTGTTTGTCAAGCAAGGTACAACAATGGAAAGGAACCTGGGCCCCAACTTCCGAATACCAGCAGCCTCCCTCTGGAGTTTTGTAGTGGTTACCATTCTCATTTGTCTCCCCATTTATGACCATTACTTTGTACCATTCATGCGTCGAAGAACTGGTCATGAGAGAGGAATCGAAATGCTTCAGAGGATTGGCATAGGAGTTGCCATCCAAGGCATGGCTGCTGCAGTTATGTATGCTGTAGAAATTCGAAGAATGAATGTCATAAGGCAGAAACACATAGCTGGGGCAGAAGAAATAGTTCCAATGAGCATATTCTGGCTATTGCCTCAACATGTTCTACTTGGTTTTGCAAATACATTCCTTATGGCTGGATTGCTAGAATTCTTCTATGATCAATCCCCAGAAGAAATGAAAGTCCTTGGCACAGCCTTCTACACGAGCACCATAGCTGCTGGGAAATACTCCAACAGCTTCCTAGTGTCTATGATAGATAAAGTTACAAGGAAGATGAGTGGTAAGAGCTGGATAGGCAACAACCTGAATGACTGCCACCTGGATTACTATTATGCTCTTCTTTTTGTCATATCTGCGCTTAATTTTGGGGTCTTTCTATGGGTATCAAGTGGATACATTTACAAGAAAGAAACAGAGGTGAATGATATTGACATTTTGAGAGCAGAACAGACGGAAAAACAAGTAGGAAAAGCTTGA 771 0.4202 MLGIWLLIIIPSNFWAVEVTVFVKQGTTMERNLGPNFRIPAASLWSFVVVTILICLPIYDHYFVPFMRRRTGHERGIEMLQRIGIGVAIQGMAAAVMYAVEIRRMNVIRQKHIAGAEEIVPMSIFWLLPQHVLLGFANTFLMAGLLEFFYDQSPEEMKVLGTAFYTSTIAAGKYSNSFLVSMIDKVTRKMSGKSWIGNNLNDCHLDYYYALLFVISALNFGVFLWVSSGYIYKKETEVNDIDILRAEQTEKQVGKA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2646 256 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 241 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu1g2646 256 Gene3D MFS general substrate transporter like domains 1 239 IPR036259 -
Ssu1g2646 256 Pfam POT family 1 196 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu1g2646 256 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 1 241 - -
Ssu1g2646 256 SUPERFAMILY MFS general substrate transporter 4 227 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2646 Ssu-Chr1 71946125 71946895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2646 4 240 Organic Solute Cotransporters AT2G40460 58.650 5.42e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2646 - - gmx:100805054 447.973