Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2635 ATGTTCGATAACATAGGTGAGGAACTCACAATAGAGAGCGACACGATTCCATGGCTGATTTTGACTCAACTACTagtcctcctcctcctccttgcACTCCTCTTTTTCTTCGCCGTCTTCCCTTTGGATCCCGACGACAACGACGACGTCGCCGCCGACACGCTCCCTCCGTCCACCTCTTCCAATGTCTTCCGTTTCGAAGATATTCAGCAGATTGACTTACCGCTCCCCAACCACCATTCATCGCCCACTCTTCCAACCACCAGTCAACACCGTAAGCTGCAGGGTGGACAGAACCTAATTATAAAAGGCGAAATAGCAACGGGTCCAAGCATGAGAAGGGAAGAGATTATGGAGGGGGAGGATTCATCACTGTATTTCCACCCTTGCCATTATTTTCAATTAGCCACGGTGGCATTTCTCAAATGTTTCGGCCTGGATTCTACATCTGACAGCCCTTCAACACGAAGacataggaaaagaaaagaaagttga 495 0.4444 MFDNIGEELTIESDTIPWLILTQLLVLLLLLALLFFFAVFPLDPDDNDDVAADTLPPSTSSNVFRFEDIQQIDLPLPNHHSSPTLPTTSQHRKLQGGQNLIIKGEIATGPSMRREEIMEGEDSSLYFHPCHYFQLATVAFLKCFGLDSTSDSPSTRRHRKRKES 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2635 164 Pfam Elicitor peptide 1-7 118 160 IPR035176 GO:0045087
Ssu1g2635 164 PANTHER TRANSMEMBRANE PROTEIN-RELATED 4 163 - -
Ssu1g2635 164 PANTHER TRANSMEMBRANE PROTEIN 4 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2635 Ssu-Chr1 71731007 71733285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2635 - - gmx:100800087 176.792