Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2631 ATGGCTCTCGCTTTGAACATCTCAGTGTGTTTCCCACAGCAGCGTTGGCCGCCCACTCTCTTCAAACCCACCAAACCAACTCTTTCCTTCCCCGCCGCTTCCGCTTTCTCTTCCTTGACTCAACTCAGCGTGGGCGAGGATTTTCCCGCCAACTACGGTGATTGGCTTCCGAAGCCCCACCTCGAGGTCCGCAGAAGATGCGGCATCCTGCTCCATCCGACGTCGTTTCGCGGTCCGCACGGCATCGGCGATCTCGGGGACGAGGCGTTCCGTTTCATCGACTGGCTCCGTCACGCGGGGTGCTCCATTTGGCAGGTTCTTCCTCTCGTGCCACCCGGCAGAAAGGCCAACGAAGAGGGATCCCCTTACTCTGGCCAGGACGCGAATTGTGGCAACAGGCTCTTGATCTCTCTTCAGGGCCTTGTCGAGGATGGATTGTTGGAAAAACACGAGCTTCCTCAACCAATTGATGCAGAGCGCGTGAATTTTTCACTTGTTGCTGATCTTAAGGATCCTTTGATCACTAAAGCTGCAGAGAGGCTCATTTCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAATTTTCGAAGGGACACTAACATATCAAGCTGGCTTGAAGATGCGGCCTATTTTGCTGCTATTGATGACAGTTTAAACACATTCAGCTGGTACAATTGGCCTGAACCTTTACGAAATCGCCATCTTGTAGCTCTAGAAGATATTTACCAACAAAAGCGAGATTTTATAAATGTATTTGTTGCCCAACAATTCTTGTTCCAAAGGCAGTGGCAGAAAGTTCGCAGCTATGCACAGAGTAGGGGAATCAGCATAATGGGAGACATGCCCATATATGTTGGTTATCATAGTGCAGATGTTTGGGCAAATAAGAAACAGTTTTTACTGAACAGGAAGGGCTTTCCTCTTTTAGTTAGTGGTGTTCCTCCTGATGCGTTCAGCGAAACTGGTCAGCTTTGGGGCAGccCCCTGTATGATTGGAAAGCCATGGAGAAAGATGGATACTCATGGTGGATACGTCGCATACGACGCgctcaaaatttatttgatgaatttaggATTGACCACTTTAGAGGATTTGCTGGATATTGGGCTGTTCCCTCTGAAGCAAAAGTAGCTATGCATGGAAAGTGGAAGGTAGGACCTGGAATGTCCTTATTTGATGCCATTTTCAGAGCTGTTGGAAGGATTAATATTATAGCAGAAGACTTGGGAGTTATCACTGAGGATGTTGTCCAACTAAGAAGATCCATTGGAGCACCTGGAATGGCTGTTCTCCAGTTTGGGTTTGGAAGTGATGCTAATAATCCTCATTTGCCTCATAATCACGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGAAACAATTGAAGGTTGGTGGGAAGCTTTGAACCAAGAAGAGAAATCCAATGCACTAAGTTATCTTTCATTAAACAAGGAAGATGACATTTCATGGGCGCTAATCCAGAGAGTATTGGCTTCTGTTGCTCAAACAGCAATAATACCTATGCAAGATGTACTTGGACTGGGTAGTTCTGCCAGGATGAATATTCCCGCAACTCAGTTCGGAAACTGGGGTTGGAGAATTGCAAGTTCGGTGAGCTTTGATGGCTTGGAAAGAGAGGCAGACAGACTCAGAGAAATGCTTTTAACGTATGGCCGGCTTTGA 1692 0.4634 MALALNISVCFPQQRWPPTLFKPTKPTLSFPAASAFSSLTQLSVGEDFPANYGDWLPKPHLEVRRRCGILLHPTSFRGPHGIGDLGDEAFRFIDWLRHAGCSIWQVLPLVPPGRKANEEGSPYSGQDANCGNRLLISLQGLVEDGLLEKHELPQPIDAERVNFSLVADLKDPLITKAAERLISSEGELKTQLENFRRDTNISSWLEDAAYFAAIDDSLNTFSWYNWPEPLRNRHLVALEDIYQQKRDFINVFVAQQFLFQRQWQKVRSYAQSRGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKDGYSWWIRRIRRAQNLFDEFRIDHFRGFAGYWAVPSEAKVAMHGKWKVGPGMSLFDAIFRAVGRINIIAEDLGVITEDVVQLRRSIGAPGMAVLQFGFGSDANNPHLPHNHECNQVVYTGTHDNETIEGWWEALNQEEKSNALSYLSLNKEDDISWALIQRVLASVAQTAIIPMQDVLGLGSSARMNIPATQFGNWGWRIASSVSFDGLEREADRLREMLLTYGRL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2631 563 SUPERFAMILY (Trans)glycosidases 45 562 IPR017853 -
Ssu1g2631 563 TIGRFAM malQ: 4-alpha-glucanotransferase 61 547 IPR003385 GO:0004134|GO:0005975
Ssu1g2631 563 Gene3D Glycosidases 62 563 - -
Ssu1g2631 563 Pfam 4-alpha-glucanotransferase 71 538 IPR003385 GO:0004134|GO:0005975
Ssu1g2631 563 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 32 563 IPR003385 GO:0004134|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2631 24 563 Glycoside Hydrolase AT5G64860 72.928 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2631 K00705 - gmx:100785271 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2631 1 71687998 71692419 Ssu1g2631 1 71687998 71692419 ECH