Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2615 ATGTCTTCTGTAAGCAAGGGTGATAGAAAGGCTACCATTGATGCAGCATCGTGGTTGTTCAATGTGGTCACGTCTGTGGGAATAATCCTTGTGAATAAAGCCCTGATGGCTACTTATGGTTTTAGTTTTGCTACAACTTTAACCGGTCTGCATTTTGCCACAACAACCTTGTTGACGTTTATTCTTAAATCTCTGGGATATATCCAGACCTCTCATCTTCCATTATCTGATATAATCAAATTCGTCTTATTTGCAAATTTCTCCATTGTTGGAATGAACGTGAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATTGCTAAGCTGAGCATGATTCCAGTATCTTGTTTCCTGGAGGTTGTCCTCGACAATGTGCGATATTCCAGGGACACAAAGCTTAGTATTGTTTTGGTTTTGCTTGGCGTTGCTGTTTGTACGGTCACTGACTGTCAGTGTCAATGCAAAGGGTTTCATAGCTGCTGTAATAGCCATTTGGAGCACAGCCTTGCAACATATGTGCATTTTCTTCAGAGGAAGTATTCTATTGGGTCATTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTGCTAGCAAACGAGTTGATGCCTACAGGCTATGGTTTGACATCCACCTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACGAACCTCAGCCAGTTCATTTGCATTGGTAGGTTCACGGCTGTAACATTCCAAGTCCTTGGTCACATGAAGACTATTCTGGTCCTGATCTTAGGATTCATTTTCTTTGGAAAAGAAGGTCTCAATCTACATGTTGTTCTAGGCATGATCGTTGCAATAGCAGGAATGATCTGGTATGGCAATGCTTCTTCTAAGCCAGGGGGGAAAGAGCGCCGTAGCTTTTCCCTTCCCAAAACACAAGATTATAGTGCACTACCTGTGTCCTCTGAAACAGACACGAAGgaatag 969 0.4262 MSSVSKGDRKATIDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTFILKSLGYIQTSHLPLSDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSIVLVLLGVAVCTVTDCQCQCKGFHSCCNSHLEHSLATYVHFLQRKYSIGSFNLLGHTAPAQAASLLLANELMPTGYGLTSTLFIILSCTIAVGTNLSQFICIGRFTAVTFQVLGHMKTILVLILGFIFFGKEGLNLHVVLGMIVAIAGMIWYGNASSKPGGKERRSFSLPKTQDYSALPVSSETDTKE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2615 322 MobiDBLite consensus disorder prediction 292 322 - -
Ssu1g2615 322 Pfam Triose-phosphate Transporter family 24 286 IPR004853 -
Ssu1g2615 322 MobiDBLite consensus disorder prediction 304 322 - -
Ssu1g2615 322 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 303 - -
Ssu1g2615 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 206 287 - -
Ssu1g2615 322 PANTHER SOLUTE CARRIER FAMILY 35 7 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2615 Ssu-Chr1 71380772 71385590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2615 16 292 Organic Solute Cotransporters AT5G05820 23.077 3.00e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2615 - - gmx:100800306 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2615 1 71380772 71385590 Ssu1g2615 1 71380772 71385590 ECH