Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2604 ATGGTGCCGCAACCAATTTTGCACCTTACCCTGTTGCCATTAATGATCTGTCTGACCACTCTTTCTTCGGCTGCCGCCGATCCCACAGATGGGTTCACCCGTCTTCCATTAAGTAACTCAAACTTCCAAGTCCAGAAGCCTTACGACGTTCCGGTCGAGCAGCGCTACAGCTTTTCAAATGGAGTGCACAAATTTTGGGTATACTCCACGGACAAGCCTCACACACCTACCAGCGACACAGCGCCACGAACTGAGATTCGCATCACTGGATACGATTTTACATCTGGTGTGTGGCAATTTGAAGGGTATGGTTACGTGCCTAGTGGCACAAGCGGGGTGTGCATCCAGCAAGTGTTCGGTGGAGTCTCCTCTGCCACAACCTCGCAGACTAGGGTCTATAGTGGTTCTCTCACTCATTATAACGCCCCTGTTCTGGAACCAAACATCTACAATAAATGGTTCCGGTTTAACGTGATCCATGATGTGGGTGCCAATGGAGTGCAGATTTTTATTAATGGGGTGTCCAAGTTTAATGGAGCTGGCCGTGGAGCCAGCTCTCACTACTTCAAGTTTGGGGTTTACGCACAGAACGGTGCTTCCAACTACATGGAATCTCGTTGGAGAGATATCaagatttttagaaaatag 648 0.4799 MVPQPILHLTLLPLMICLTTLSSAAADPTDGFTRLPLSNSNFQVQKPYDVPVEQRYSFSNGVHKFWVYSTDKPHTPTSDTAPRTEIRITGYDFTSGVWQFEGYGYVPSGTSGVCIQQVFGGVSSATTSQTRVYSGSLTHYNAPVLEPNIYNKWFRFNVIHDVGANGVQIFINGVSKFNGAGRGASSHYFKFGVYAQNGASNYMESRWRDIKIFRK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2604 215 Gene3D - 37 214 - -
Ssu1g2604 215 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 16 215 - -
Ssu1g2604 215 PANTHER ALGINATE LYASE 16 215 - -
Ssu1g2604 215 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 203 IPR013320 -
Ssu1g2604 215 Pfam Alginate lyase 40 213 IPR014895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2604 Ssu-Chr1 71079391 71080494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2604 - - gmx:547636 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2604 1 71079391 71080494 Ssu1g2604 1 71079391 71080494 ECH