Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2589 ATGGGAGCGTCCACTTCGGCGGAGCCGAGGGTTTCGGCGGAACAGAAAGAGGCGGAAGCCGTCGCCGCCTCCACCGGAGCTCTTCCAATGCTTCAGAAAGCTTTCTCCAAGCTCGCCAATCCCGAGACAAACGCCGTTCCCTTAGAAAATCTACAGCAATGCTTTAGTTTCCCTGGCGAACGTCGAGCTTATTCCGGAAGCAACGTGCCGGATTCGTTTCCGGCGTTGTTCGATCCCTTAGGCTCGTGCCTAGTGGATCAATTCTTCGTGCCCGATAAAGGGGGAATAAGCTGGGTTGAATTTGTGAGGGGTTATAACAAGTGCTGTGCTCGGGTGTCGGCGTCGATTTCGCTGAACATGCTGGTCAGAGTGTTCGTTGCCGTCTCGGGAAGTGCGAACGTGGCTCCGCGTTTGGAGTTTGAATCAGGGGATGCCGATTGCAAGATTAACGGGCACCTTCTTCCTGGCCACGTGTTTCTGCTGCTTTCCCTGTGTTGGGTTGTGTCGTGGGGTTCTAGAAACTTGAAAGGGGAAGGGAACCTCGGCCTACCGGATCTGAATCATTTGGTGTTGTCGGCGTGTGCTCGAGTTGAGGGCGGTTTGAATGTGTGGGATTGTGATGTCTCGAGCTTGGAGGTTCAGCTTCCTGCTGGGAAGTTTGTTACGTGGGTTATGAGTACCGTGCCGTGCCTCCCGGATTGCTTAAGGCAGTATTTTCATGCTAGACTGCAAATGGCAGAAACCGATGGGGTTGAATTGGCGTCCTCTAATTCCTCCTCTATTGGAGATATTTCATCAATTGCTGCATATGATTATATTTTGACCCAAGGAAGGGCATGGGCAATTTCTATCACACAGAAAAGTACAGTAAATGAAGAGATTTCTAGAGCATTTATAAGCAATGGAGGTGGAATGGATGATAAACTTGTTTATCGGTCATCCACTCATGGAAGAGGCCTCGGCAGATTTTGGTCTCATGTTGAAGGTTACAAAGGtcctttgttaattttgatagcTGCAAGTTCAGGAGATGCTCATGAGGGAAATTCCATTGATAGGAAATGGGTTATAGGTGTTCTAACAGATcaaggttttgaaaataaagatatCTTCTATGGAAACTCTGGATGTTTATATTCTATTGGTCCAGTGTTTCATGCGTTTCCACCTACTGGTAAGGAAAAGAATTTTGTTTATAGCCACTTGCATCCTACTGGTAAAGTATACCAACCGCGTCCAAAACCAATTGGAGTTGCATTTGGAGGAACTCTGGGAAATGAGAGAATATTTATAGATGAAGATTTTGCAAAAGTGACTGTTCGCCATCATGCTATTGACAAAACTTACCAGAGTGGATCCCTCCTTCCGGATCAGGGTTTCCTACCTGTTGAGGGTCTGATTTCAGAAGTTGAAGTTTGGGGACTTGGTGGGAAAGTAGCAAAGGAAGTGCAGAACTCTTACAAGAAGAGAGAAGAACTTTTCACTGAGCAAAGAAGAAAAGTTGACTTGAAGACATTTGCAAGTTGGGAGGATTCGCCTGAGAAAATGATGATGGACATGATGGCTGATCCAAATGCTGTTCGAAAGGAAGACCGCTGA 1599 0.4597 MGASTSAEPRVSAEQKEAEAVAASTGALPMLQKAFSKLANPETNAVPLENLQQCFSFPGERRAYSGSNVPDSFPALFDPLGSCLVDQFFVPDKGGISWVEFVRGYNKCCARVSASISLNMLVRVFVAVSGSANVAPRLEFESGDADCKINGHLLPGHVFLLLSLCWVVSWGSRNLKGEGNLGLPDLNHLVLSACARVEGGLNVWDCDVSSLEVQLPAGKFVTWVMSTVPCLPDCLRQYFHARLQMAETDGVELASSNSSSIGDISSIAAYDYILTQGRAWAISITQKSTVNEEISRAFISNGGGMDDKLVYRSSTHGRGLGRFWSHVEGYKGPLLILIAASSGDAHEGNSIDRKWVIGVLTDQGFENKDIFYGNSGCLYSIGPVFHAFPPTGKEKNFVYSHLHPTGKVYQPRPKPIGVAFGGTLGNERIFIDEDFAKVTVRHHAIDKTYQSGSLLPDQGFLPVEGLISEVEVWGLGGKVAKEVQNSYKKREELFTEQRRKVDLKTFASWEDSPEKMMMDMMADPNAVRKEDR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2589 532 ProSiteProfiles TLDc domain profile. 280 476 IPR006571 -
Ssu1g2589 532 Pfam TLD 309 476 IPR006571 -
Ssu1g2589 532 SMART 109ultra 287 476 IPR006571 -
Ssu1g2589 532 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 519 - -
Ssu1g2589 532 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 519 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2589 - - gmx:100786867 959.903