Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2588 ATGCCGCCGGCGAAGAGGGGAAAAGCAAAGGCGGAGCCTAGGGTTATAACTCCGTCGGAAAAACCTAATGATTTTCCGTCTTGTATTCGGTGCGTCCCTCCTTCGTCCGTCGCGATAACCATCCACGCCAAACCTGGTTCCAAATCCGCATCTGTAACtgatatcaGCGACGAAGCGGTGGGAGTGCAAATTGACGCACCTGCCAGGGATGGCGAAGCAAATGCGGCTCTTCTCGATTACATCAGTTCTGTTTTAGGTGTGAAACGAAGACAAGTCTCTATAGGCACCGGTTCTAAGTCGAGAGATAAGACAGTCATTGTGGAAGATGTAACTCAGCAACATGTTTTTGACGCTTTGGATAAAGTCTCAAAGCAGCAGtga 381 0.4829 MPPAKRGKAKAEPRVITPSEKPNDFPSCIRCVPPSSVAITIHAKPGSKSASVTDISDEAVGVQIDAPARDGEANAALLDYISSVLGVKRRQVSIGTGSKSRDKTVIVEDVTQQHVFDALDKVSKQQ 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2588 126 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g2588 126 Pfam Uncharacterised ACR, YggU family COG1872 37 108 IPR003746 -
Ssu1g2588 126 Gene3D - 29 125 IPR036591 -
Ssu1g2588 126 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
Ssu1g2588 126 SUPERFAMILY YggU-like 27 113 IPR036591 -
Ssu1g2588 126 PANTHER OS04G0686300 PROTEIN 1 125 - -
Ssu1g2588 126 SMART DUF167_2 33 109 IPR003746 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2588 K09131 - gmx:100527290 238.424