Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2576 ATGGCTTCAAAGATCTTCTTCCTATTTCTCCTCTTTCTAGCACACCCTCTTCCACATGCACTTGCGGATGGAGATGCCAGTTTGATCAAAAGAACTTGCAAGAACACCAAGTACTACAATCTATGCTTCTCTTCCCTCAAATCCGATCCCAGCAGCCCAAAAGCAGACCCAAAGGGCCTAGCTGTGATCATGATTGGGATTGGAATGACCAATGCCACTTCCACTTCTTCCTACTTGTCCTCTAAGTTGCTTAGCCCCACCAATAACGCAACGTTGAAAAGGGTTCTCAAGGAGTGTGCAGATAAGTACAGCTATGCTGGTGATGCCCTCCAAGCTTCGGTGCAGGATTTGGCTAATGAGGCTTATGACTATGCTTACATGCACATCTCTGCCGCCAAAGATTACCCAAATGCTTGTCACAACGCTTTCAAACGGTACCCCGGTTTGGTTTATCCTCTTGATCTTGCTCGTAGAGAAGATGGTTTGAAGCATATCTGTGATGTGGCAATGGGGATTATAGATAATCTCGATTGGTAG 537 0.4581 MASKIFFLFLLFLAHPLPHALADGDASLIKRTCKNTKYYNLCFSSLKSDPSSPKADPKGLAVIMIGIGMTNATSTSSYLSSKLLSPTNNATLKRVLKECADKYSYAGDALQASVQDLANEAYDYAYMHISAAKDYPNACHNAFKRYPGLVYPLDLARREDGLKHICDVAMGIIDNLDW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2576 178 CDD PMEI_like 33 175 - -
Ssu1g2576 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 176 IPR035513 -
Ssu1g2576 178 Pfam Plant invertase/pectin methylesterase inhibitor 27 171 IPR006501 GO:0004857
Ssu1g2576 178 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 10 176 - -
Ssu1g2576 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 176 IPR035513 -
Ssu1g2576 178 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
Ssu1g2576 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 176 - -
Ssu1g2576 178 SMART PMEI_2 24 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2576 Ssu-Chr1 70547422 70547958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2576 - - gmx:100810425 303.138