Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2560 ATGGCGTTCTCTGTGACTCTCTCCAACACCGCTTTCCCTTCCCTTCCTCGCTTCCCGCAAACTTTGAGAACAACAAGTGTCCGTTTCCCGTTGATTCGTGCTGTGCAAAGCGGTGAAGCAAACAGCCCAGAGAGTAAGAGTGAAGGGTCATCTAATGCTCAGTCTTCAAGTGCTGCCCCTAGGATTCCCAAGAAACCCGTCTATTCCATGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCAATAGCGTCAATTATCTTTCTGTTGGACATCCACCTTATTACAAAGGATTAGACTACATTTATGAAGACCGTGGTGAGGTCCTGGATATGCGTATATTTGAAACAGGAGAGCATGCACTTGTAAGTAACTTGCATCTATCTCATCGTGCTTTCATAGAATAcagaatatttagaaaaataacaagtcTGTCCAATGTTCTGATAATGCGAGAGACGACTGCAAGAATCAAAACTACATCTCTTTTTACAATGCCAATGATGTTCTGTAGTTTAAGCAAAGCAAAGCCGATATCAATTGATGGCATGACATATGTACTTCATTccaattatgaaaaaattgtcTAG 597 0.3953 MAFSVTLSNTAFPSLPRFPQTLRTTSVRFPLIRAVQSGEANSPESKSEGSSNAQSSSAAPRIPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEHALVSNLHLSHRAFIEYRIFRKITSLSNVLIMRETTARIKTTSLFTMPMMFCSLSKAKPISIDGMTYVLHSNYEKIV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2560 198 MobiDBLite consensus disorder prediction 37 63 - -
Ssu1g2560 198 Pfam Cyanobacterial and plant NDH-1 subunit O 70 126 IPR020905 GO:0005886|GO:0016655
Ssu1g2560 198 MobiDBLite consensus disorder prediction 38 59 - -
Ssu1g2560 198 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 126 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2560 - - gmx:100500669 201.445