Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2558 ATGAAAATGAAGTCTTCTTCTACCAGTGAAGAACATGACGTGGAGAATGCCAAGTTGgacaaagacaaagaaaaaactCCAAGAAATGGGAGGGTAGTTAATAAAGTCCCCAATCAGGCCTTTTTGTCTGGGCTTGCATATTGCTTTTCCTCCTGCGGCATGATATTGGTTAACAAGTTTGTACTTTCCAGCTATGATTTTAATGCTGGGATATCCTTGATGTTGTACCAGAATTTCGTTTCAGTTGCTATTGTATCCGTGTTGAGCCTTCTGGGTTTAATTTCAACTGAGCCACTGACATGGAGATTGATTAAGGTCTGGTTGCCtgtgaatgttatatttgtTGGAATGCTCATTACAAGCATGTTTAGCTTGAAATACATTAATGTAGCCATGGTGACAGTCCTGAAGAATGTTACTAATGTCATAACCGCCCTTGGTGAAATGTACTTGTTCAAGAAGCACCACGATGGCAGAGTCTGGGCAGCTCTGTTTCTAATGATCATTTCAGCAATAACTGGTGGGATTACTGATCTCTCTTTTAATGCAGTTGGCTATGCTTGGCAGACACTAAACTGTTTCTTAACTGCATCATATTCTCTGACCCTCCGAAGGGTCATGGATACGGCAAAGCAAGTTTCAAAATCAggaaatttaaatgaattttcgaTGGTCTTGTTGAACAACACCCTTTCTTTGCCTTTGGGAATTTTCCTGCTTGTTGTTTTCAATGAGGTGGATTATCTCTTAAGAACGCCACTTCTGAGATTGCCTAGCTTTTGGTTGGTGATAACCTTTAGTGGATTTTTGGGTCTAGCAATCAGCTTCACATCCATGTGGTTTCTTCATCAGACGGGGGCTACAACTTACAGGTGA 876 0.3893 MKMKSSSTSEEHDVENAKLDKDKEKTPRNGRVVNKVPNQAFLSGLAYCFSSCGMILVNKFVLSSYDFNAGISLMLYQNFVSVAIVSVLSLLGLISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFKKHHDGRVWAALFLMIISAITGGITDLSFNAVGYAWQTLNCFLTASYSLTLRRVMDTAKQVSKSGNLNEFSMVLLNNTLSLPLGIFLLVVFNEVDYLLRTPLLRLPSFWLVITFSGFLGLAISFTSMWFLHQTGATTYR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2558 291 MobiDBLite consensus disorder prediction 1 30 - -
Ssu1g2558 291 PANTHER GDP-MANNOSE TRANSPORTER 1-RELATED 22 290 IPR038736 GO:0005458
Ssu1g2558 291 Pfam Triose-phosphate Transporter family 42 290 IPR004853 -
Ssu1g2558 291 PANTHER SOLUTE CARRIER FAMILY 35 22 290 - -
Ssu1g2558 291 SUPERFAMILY Multidrug resistance efflux transporter EmrE 92 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2558 Ssu-Chr1 70126523 70129691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2558 11 291 Organic Solute Cotransporters AT2G13650 78.873 1.98e-153 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2558 K15356 - gmx:100808480 513.072