Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2525 ATGAACGATTTCGACGGTCTCTTAACCACCGATTTCGGGTTCAAGCCCCAAGGCAAATCGGCGCCAATGGCTGCATCCAAAGCCTCCTCCAACGCTTCCTCGCTCAACTTCGACTTAGGTTCCCGATCCGCTAGCGCTTCCAATTCCTTCGCCGCCGGCGATTCCGTCAACGCCGCTTCCTTCGACGATCTCTTCCGCGCCAAATCGGACGCGGCCTTCAACTTGAACTCCATGTTTCGCGACTCCGCCGATTTCGGTTCCAAGTCCGTTAACTCGACCACGTACGACAAACCGGTCTACGACGACGACATTTTCGACGGCGTTCCCGGCCTCAAGAGTTCCTCCAAGGTCTCCTACGGCGACGTTTTCGCTCCGGGAGGGAGCGCCGCCGCGTTCGACGATCTTCTCGGCGGGTTAGGCAAATCGAAGAAATCGGAGAAGGTCGAGAAAGTTGCCGCGgattttgatgatttgatcCCTGGATTCGGGAGCAGTAAGGCCTCCACTGATAGGAACATTCCTGATATTGATTTGTCATCAGAGCCTACTGTCAATGCTTCTAAAACAGCCTCCAGTGCAACAGAAGACCCTTTCAAAGTGTTTGAATCAACTTCAGCCCCAATGGATTCATCCTCAGACTACTTCACAGACCCATTGGaagaaattagtaaatttacTAGTTCTAGAAGCACAAAAAATGATAACTCGTCAAATTCTAATGAAGTATATGATGATATTGATCCCTTTGGTGGACTTGGAAATTCTGTACCTGCATTCTCAGCAGAGAGAAATAGCAGGAAGGGTAGCAGCTCCCCAATGCCAAAGTCAAATACAAGTTCAAGCTGGACCAGAGATAAAGAATCAAATGACAAATCGTCTGTGCGGAGTCCTGAGAGATGGACACAAAGCAAGATTCCTGTTGATTGTGATCAGGAATTTCATCAGGCTGCATTTGACTTGCCCACATATTCATCCAATTCTTACAAACCAGTTGGCCAAAGGTCTACTTCCCCTTCATATGATAACGATGGTTTTAGACCGGCAGATATGTCTCCGAAATATGAAGAAAAGTTGGAACCAAATGATGTATGGCTGACGGTATCAGAGATTCCTCTTTTCACTCAGCCAACTGCTGCTCCACCACCTTCAAGACCGCCTCCTCCTCGACCAGTGCATATCCCCAAGTCGGGAGCAGGTTCATCAGCTTCTGCCAATGTCAGAAAGAAGGATAATGAATATTCTTCGTTTCCAAGTTCCACTAAATTTTCTCAGGGTCCTAAATCTGCTCCTGCTGCAGCCAAGTTATCTTCTGCATCTCAGTTTGATGAACTTGAAGATTTTGCCATGGGCAGGAGTCGTGGTAATGATGATGAATGTGGAAATGGTCTTTCTGATGAAGAATTAGAGATGAACTCAGCTGCTGCAGCTATGAAAGAGGCTATGGATAGAGCTGAAGCTAAATTTAGGCATGCAAAGGAAGTTAGGGAGAGAGAAAATACAAAAGCTGCTAAAAGCAAGGAACCTGTGCAATTGGAAAAAGATGCCAGAGCTGTGTCAGAGGATAGAGGAAAACAGGAAAGGTTAGACCATGAACGGCAGCAAAAGGAGAGAGAGGAAAAGGAACAAAGAAGACATGAGAGCGAAAGggaggagaaagaaagagaacaaCAGAGacttgagagagaaagagaaaaggcaAGACAGGCTGTAGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCAGCTGAAGCACGTGAAAGAGCTGCTGCTGAAGCTCGCCAAAGAGCTGAGAGGGCTGCTGTTGAGAAAGTTAATGCAGAAGCCAGAAAGCGTGCTGAAAGGGCTGCAGTCCAGAGGGCACAAGCTGAAGCCCGTGAAAGGGCTGCTGCTGAGGCAAAGGAAAGGGCTGAAAAGGCTGCTGCAGAGGCAAAGGAGAGGGAAGCACGGGAAAGAGCTGCAGCTGCAAGAGCTGAACCTGAAGCTAGAGTTAAAGCAGAACGTGCTGCTGTAGAAAGGGCTGCTGCAGAGGCTCGAGAAAGAGCTGCAGCACAGGCCAGAGAAAGAGCTGCGGCTGCTGCAAGGATGAACCAACAACAGAATGACAATGATCTTGAATCATTCTTCAGCACAGGTGCACGAGCTAACAGTGCTCCAAGGCCTCCTAGGCCCAGCTCTTCAGACTCTGTATTTGATGCCCAATTTCAGTCAGATGTAACCCGGAAATCTACAACTGTAtcttcaaacatgaagaaaGCCTCATCATCCACTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGCTGCTCCATCATCATCTGGAGAATTTCAGGAAGTTGAAGGGGAAAGTGAAGAAAGACGAAGAGCCAGGTTGGAACGCCACCAGAGGGCTCAGGAGCGTGTGGCTAAAGCATTGGCTGAGAAGAATCAACGGGACCTACAAACTCAAAGAGAGCAAGCTGAGAGACATAGGGTTGCTGAAACATTGGATTTTGACATCAAGCGCTGGGCTGCAGGAAAAGAGGGGAACTTGCGTGCTTTGCTTTCCACCTTACAATATGTTCTGTGGCCTGAATGTGGTTGGCAGCCAGTTTCTTTGACTGATTTGATTACAGCCGTTGCTGTTAAAAAGGTTTATAGGAAAGCTACATTGTGCATTCATCCTGATAAAGTACAACAGAAGGGTGCCACTATTCAACAGAAATATATTGCTGAGAAGGTTTTTGATCTACTCAAGGTATTTCAGgcctttttatattattcatacatGCAGAAATATCCATGCTTCATAAAGAAAGAAGTGGTTGCCAGCGGCAAATAA 2823 0.4555 MNDFDGLLTTDFGFKPQGKSAPMAASKASSNASSLNFDLGSRSASASNSFAAGDSVNAASFDDLFRAKSDAAFNLNSMFRDSADFGSKSVNSTTYDKPVYDDDIFDGVPGLKSSSKVSYGDVFAPGGSAAAFDDLLGGLGKSKKSEKVEKVAADFDDLIPGFGSSKASTDRNIPDIDLSSEPTVNASKTASSATEDPFKVFESTSAPMDSSSDYFTDPLEEISKFTSSRSTKNDNSSNSNEVYDDIDPFGGLGNSVPAFSAERNSRKGSSSPMPKSNTSSSWTRDKESNDKSSVRSPERWTQSKIPVDCDQEFHQAAFDLPTYSSNSYKPVGQRSTSPSYDNDGFRPADMSPKYEEKLEPNDVWLTVSEIPLFTQPTAAPPPSRPPPPRPVHIPKSGAGSSASANVRKKDNEYSSFPSSTKFSQGPKSAPAAAKLSSASQFDELEDFAMGRSRGNDDECGNGLSDEELEMNSAAAAMKEAMDRAEAKFRHAKEVRERENTKAAKSKEPVQLEKDARAVSEDRGKQERLDHERQQKEREEKEQRRHESEREEKEREQQRLEREREKARQAVERATREARERAAAEARERAAAEARQRAERAAVEKVNAEARKRAERAAVQRAQAEARERAAAEAKERAEKAAAEAKEREARERAAAARAEPEARVKAERAAVERAAAEARERAAAQARERAAAAARMNQQQNDNDLESFFSTGARANSAPRPPRPSSSDSVFDAQFQSDVTRKSTTVSSNMKKASSSTNIVDDLSSIFGAAPSSSGEFQEVEGESEERRRARLERHQRAQERVAKALAEKNQRDLQTQREQAERHRVAETLDFDIKRWAAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAVAVKKVYRKATLCIHPDKVQQKGATIQQKYIAEKVFDLLKVFQAFLYYSYMQKYPCFIKKEVVASGK 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2525 940 Coils Coil 528 659 - -
Ssu1g2525 940 Coils Coil 792 824 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 398 426 - -
Ssu1g2525 940 Gene3D DnaJ domain 792 919 IPR036869 -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 679 732 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 374 664 - -
Ssu1g2525 940 Coils Coil 463 501 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 320 342 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 320 357 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 780 794 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 165 212 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 375 393 - -
Ssu1g2525 940 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 613 - -
Ssu1g2525 940 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 604 913 - -
Ssu1g2525 940 SUPERFAMILY Chaperone J-domain 762 913 IPR036869 -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 221 243 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 158 307 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 258 283 - -
Ssu1g2525 940 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 613 - -
Ssu1g2525 940 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 604 913 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 1 26 - -
Ssu1g2525 940 Coils Coil 661 703 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 770 794 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 694 732 - -
Ssu1g2525 940 MobiDBLite consensus disorder prediction 480 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2525 Ssu-Chr1 69547542 69560464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2525 - - gmx:100777111 1084.71