Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2496 ATGGTACCCTCTCCAGCGAAGCGAAAGGCATTTGCATTGAAGAAGCTACCCAGAAACAGAACATGGGACTGTGAATATGAAATATACAGTCACTTGCAAAAGAAGAATAGGGTCCTCAAAAGTGGAACTGAAAAGTTCAACTACTTCAATACCCTTTTGCAGGACTTTGCTGTTAAGGATCCAAAGGGTGACCCAGACTTGGTGCAATTCATGGATGGTTTATACAGCATTGTTCAGTCTCAGGTGCTTCATCTTCAGGACCCTAACATAGAGAACACTGCTGAAGAAAACGGtattgatgatgatgacgacgacgacgacgacgacgatgaTGATGTGATGGTGGATTCGCAGCATAAGTATTTCATGGATCATTTAAGGCCTGATGGAAAATCTTATGTACTTGATATCCCTGAGGATGGTGTCTTTGAAAAGTACGAGCCTGAGTCATCAACTCCTGATAATACTGCTATCTGCACAATCAATAATGCAAATCATGTTTCAAATGAAGAGGTCAATGTGTGCTTAGACACAGATATGCATGTGAATGCTTGTGCAAACTATGAGAGTCCTAATGTTATTAGCAATCATGTGAAGCATAGGGGTAGGAAGCCAAAAAGTGCAAAACTCTCTGCTGCTGTGAATGGTAATGTTAAGAGCAGTGATGTGACTTCAAAGGCACAAAAACATGTAAGTAATTTAAAGGGTACGCGCAGGAGTCCAAGGCTGAAAATGTATGATATGAAAACTGATACCCCATCCTGCTTACCAATAGTGATTGAAGATAGTGATGATGAAGCAGCAGATATAGTGCGAGGACAGGTTGTATGTATCTTAAATCATGAGTTCGTTCCCTTTGCTTATGTTCAATACTGTTcatttagtttttgttatttatatatattaagtgttGCTTCCTTGTTGAAGGTGGAACATTGTTGGCAAGAATATAATGAAGCCTATGCAAGGACACTTTTCAAAGAAAAACTCATGGAAGAACTTAAGGCGCCTTACTGTGAGGAAGAGCGCAAGAGGCTTTTACATGACATTACTGTTCGAAAGCCAGTCCAACACCATAGAGACCTGCGTGGACGTATCAAAATCTATGAGAAACATTACCTTGGAATGTCTTTTCTTGATCATAATGTTGATCTTGCAGAGAAGATAGATTCAGCTCAAGATGATCATCCCAGAGTTCTGAATCTCCTGCGTGGATTTTTCTATTGGTTGAAAAATTTGTCACATGAGGGGGCATTCAAGCCATGGGAAGATTCATCGTGTTTGGATGTACTGCCACAACAATTGGAAGGATAG 1314 0.3843 MVPSPAKRKAFALKKLPRNRTWDCEYEIYSHLQKKNRVLKSGTEKFNYFNTLLQDFAVKDPKGDPDLVQFMDGLYSIVQSQVLHLQDPNIENTAEENGIDDDDDDDDDDDDDVMVDSQHKYFMDHLRPDGKSYVLDIPEDGVFEKYEPESSTPDNTAICTINNANHVSNEEVNVCLDTDMHVNACANYESPNVISNHVKHRGRKPKSAKLSAAVNGNVKSSDVTSKAQKHVSNLKGTRRSPRLKMYDMKTDTPSCLPIVIEDSDDEAADIVRGQVVCILNHEFVPFAYVQYCSFSFCYLYILSVASLLKVEHCWQEYNEAYARTLFKEKLMEELKAPYCEEERKRLLHDITVRKPVQHHRDLRGRIKIYEKHYLGMSFLDHNVDLAEKIDSAQDDHPRVLNLLRGFFYWLKNLSHEGAFKPWEDSSCLDVLPQQLEG 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2496 437 MobiDBLite consensus disorder prediction 93 112 - -
Ssu1g2496 437 PANTHER - 13 157 - -
Ssu1g2496 437 PANTHER - 150 241 - -
Ssu1g2496 437 MobiDBLite consensus disorder prediction 200 234 - -
Ssu1g2496 437 PANTHER F14J8.16 PROTEIN 13 157 - -
Ssu1g2496 437 PANTHER F14J8.16 PROTEIN 310 436 - -
Ssu1g2496 437 PANTHER F14J8.16 PROTEIN 150 241 - -
Ssu1g2496 437 PANTHER - 310 436 - -
Ssu1g2496 437 MobiDBLite consensus disorder prediction 213 231 - -
Ssu1g2496 437 MobiDBLite consensus disorder prediction 94 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2496 Ssu-Chr1 68972186 68974644 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2496 - - pvu:PHAVU_009G156700g 506.908