Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2495 ATGTACTCGAGCAACTTGATCGGCTTCATCTTAGCCGTCGTCTCTAGCGCCTTCATCGGCTCTAGCTTCATCATCAAGAAAAAAGGCCTCCAACGTGCTAGGCTCAACGGCTCACGTGCCAGCGGTGGAGGCTACGGTTACCTGCTAGAACCTCTTTGGTGGCTCGGAATGGTTACCATGATCGTCGGAGAGATAGCGAATTTTGTGGCGTACGTTTTCGCGCCTGCGGTGCTTGTCACGCCGCTTGGTGCTTTGAGTATTATTGTTAGTGCTGTCTTGGCGCATTTCATGTTGAATGAGAAGCTGCAGAAAATGGGCATGCTCGGGTGTCTTCTGTGCATTGTGGGATCCACTGAGATTGTGCTCCATGCACCTCAAGAAAAGGCTATTAGTTCTGTACAGGAAATATGGCAACTGGCAACTCAACCAGCATTCCTGTTGTACACTGCCTCGGCGGTGGCTGTGGCattctttttgattttgtatTGTGCTCCTCGCTATGGTCagactaatattttagtttatattggAATATGCTCCATAATTGGATCCTTGACTGTCATGAGCATAAAAGCAATTGGCATTGCTATAAGACTAACGCTTGAGGGTGCCGACCAGTTTGTTCAGTTTCAGACATGGATTTTTATGATGGTGGCTATTTCCTGCATTGTTActcaattaaattatcttaatatgGCGTTGGATACTTTTAACACAGCAGTTGTTTCTCCGATCTACTATGCCTTGTTCACATCTTTTACAATGTTAGCTAGTGCAATCATGTTTAAGGACTATTCTGGTCAGAGTGTAAGCAGTATTGCATCAGAGCTATGTGgtttcattactattttatctGGAACAGCTGTATTACACAGCACAAGAGAGCCAGATCCTCCAGTCAATACAGATTTATATGGTCCCTGGTCTCCAAAGGTATCGTGGTATTTCCAAGGCAATGGCGAACCTAGGAAACAGAAGGAGGAAGATGGACCaccctttaatttaattacagataTCCGGCAAGACCATTTCAAGTGA 1038 0.4229 MYSSNLIGFILAVVSSAFIGSSFIIKKKGLQRARLNGSRASGGGYGYLLEPLWWLGMVTMIVGEIANFVAYVFAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCIVGSTEIVLHAPQEKAISSVQEIWQLATQPAFLLYTASAVAVAFFLILYCAPRYGQTNILVYIGICSIIGSLTVMSIKAIGIAIRLTLEGADQFVQFQTWIFMMVAISCIVTQLNYLNMALDTFNTAVVSPIYYALFTSFTMLASAIMFKDYSGQSVSSIASELCGFITILSGTAVLHSTREPDPPVNTDLYGPWSPKVSWYFQGNGEPRKQKEEDGPPFNLITDIRQDHFK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2495 345 PANTHER UNCHARACTERIZED 1 345 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu1g2495 345 Pfam Magnesium transporter NIPA 5 295 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu1g2495 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 123 - -
Ssu1g2495 345 MobiDBLite consensus disorder prediction 319 345 - -
Ssu1g2495 345 PANTHER MAGNESIUM TRANSPORTER-RELATED 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2495 Ssu-Chr1 68957876 68965968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2495 K22733 - gmx:100783541 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2495 1 68957876 68965968 Ssu1g2495 1 68957876 68965968 ECH
Ssu5g2911 5 75721915 75728846 Ssu1g2495 1 68957876 68965968 PCT