Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2480 ATGCAATTAGGTTTTCTGCAAAATGGATTGGATTTAGCTCCAGGAGAAAGTCTGGATGGAAGTTTCAGGAAGTCTAGCTCTGTTATTTCTGCTAGTACTGTCTCTGGGACCTCAGGATTGAGCAAGTTTCTTCCTATTTCCAGAAGAGTGTTAAAGGGGCTCAAGGAATATGGAAGGAAACTGGTTGACCTGGAGTTATTCACTCAATATCTTGAGGAGTGGGTCTTGGAGAATCTAAATGGTGATTCAACAGATGGGATGCAAAGCTTTCGTTCTCCCTTCACAACTGCTGAATTGTGCAAACTTGATTTGGCATTAGAGGGGGTTCCATTTCAGCAACTCGTCCGTATGCCAATCTTCTCTGACATTTCCGATGAGCTTATCGAAGATCAGTATCTGGCTGCAGAAGATTTCCTTCATGCCATTATCATTGGACTCTGGCGTACATTTTGGCATAAAAGTGGACCACTGCCATTGTGTGTCTCTTGCCCCTCTCATATTGGTTCAAAGTTCAGTAGTGTTGAAAAGGCAATATCAAGGGGCAGGCTGAGGGAAATGCGTGGTTTggctttaatatcaaaaactgccactgattcaaaatttaaatgggATCATATGGTAGAGTTTGCCTTATTCAAGCCAGAAGTATTCTTGGACAATGATTCAAGAGTATCAGCCAGCACTATTTGTGAAGCTCTCTTTTATGGTTTCCATGTTCTTGTTTCTCGGAGTTTGAGCAAGATTAGTTCTGTCAACAGTGATTCtgttttccttttagttttagATTCTAAATGTGGATCAGTGATGAAGTTCAGTGGTGACCTTGGCAAACTTGATTTATTGAATTCAAGCAATCCATATCTATCTGTGGCTGAATGGATCAAAACTTATGCTGAAATTGGTGTCACCCCAGTGGAACCAATATGGAACCGATTAGGAAATCCAAACTGGGGGGATATAGGAACTCTACAGGTGCTATTGGCAACTTTCTACTCCATTGCACAATGGAATGGACCACCACGAAAATCAGTAGCCTCATTGATTTCAGATCATAGCTTCCGCCTTCAGAAGCGGAGGACAGAATGCTGCATCATTGAGACTGAACATGCACTGGTTCCTTATCATGGGATGACCGACCATCATGTAGGAGAGATTGTTGAGCTTgatcaaaatgaattattttccaaaaaccgAGCATCCCGTCTGAAGCTCAAGTGTGGTGACATAATGGTCTTGGATGATCCACAGCAGGGACAGAAAAGTTTCCAAATTCATGAATCTCTTGTAGGAGGGAACTATTATCTCTACAGTGCAGTTTGTCTTGATCATCCCTCAGAGTTATTAACCTTATATGTGGGTGCTCATCCGTCTAGACTTGAGCCTTCTTTGGAGGATATGAGCCTTTGGTACCAAGTGCAACGCCAAACAAAAGTCCTAAACATTTTAAGGAATCAGGGAATCTTGAGCAAATACTTACCTGAAATTGTTGCCTCTGGTAGGGTTTTACATTCTGGTCCTTGCAAGAAAGAGAGCCCCGGGGGAAGGTGTGATCACCCTTGGTGTGGGACTCCAATACTGGTGACATCTCCAATAGGGGAGCCACTATCATCCGTAGTTGCTAATGAGGGGTCATTTTCTGCGGATGAAGCAATGCGCTTGTGCCGGGACTGTCTAGCTGCTCTAAGAAGTGCAGCCATGGCTAACGTCCAGCATGGTGATATTTGTCCAGAGAACATAATACgtgtttttgaaaaacaagGTGTTAGAAACCAAGCTAATATGTATGTCCCCATATCTTGGGGGCGTGCCGTGTTGGAAGATAGGGACAGCCCTGCTATAAATTTGCAGTTCTCATCATCTCATGCACTTCAGCATGGGAAGCTGTGTCCTTCTTCTGATGCTGAAAGCATTGTCTACATCCTCTATTTTATTTGTGGAGGGACTATGTCTCTACAAGATTCTATTGAGTCTGCTTTGCAATGGAGAGAGAGAAGCTGGGCAAAGCGTTTGATCCAGCAACATATTGGTCAGGTTTCTGCTCTATTGAAAGCATTTGCTGATTATGTGGATAGCCTTTGTGGAACTCCATACCCTGTTGACTATGACATATGGTTGAAAAGGTTGAACAAGGCTGTGGAAGGCTCGGCAGATAAAGGTAAAATGATTGAAGAAGTACCCATAACATTAAGATTAGAGGATGCTGCCGAGTCTTCAGGAGCTTCTGGCCCTTGA 2232 0.4162 MQLGFLQNGLDLAPGESLDGSFRKSSSVISASTVSGTSGLSKFLPISRRVLKGLKEYGRKLVDLELFTQYLEEWVLENLNGDSTDGMQSFRSPFTTAELCKLDLALEGVPFQQLVRMPIFSDISDELIEDQYLAAEDFLHAIIIGLWRTFWHKSGPLPLCVSCPSHIGSKFSSVEKAISRGRLREMRGLALISKTATDSKFKWDHMVEFALFKPEVFLDNDSRVSASTICEALFYGFHVLVSRSLSKISSVNSDSVFLLVLDSKCGSVMKFSGDLGKLDLLNSSNPYLSVAEWIKTYAEIGVTPVEPIWNRLGNPNWGDIGTLQVLLATFYSIAQWNGPPRKSVASLISDHSFRLQKRRTECCIIETEHALVPYHGMTDHHVGEIVELDQNELFSKNRASRLKLKCGDIMVLDDPQQGQKSFQIHESLVGGNYYLYSAVCLDHPSELLTLYVGAHPSRLEPSLEDMSLWYQVQRQTKVLNILRNQGILSKYLPEIVASGRVLHSGPCKKESPGGRCDHPWCGTPILVTSPIGEPLSSVVANEGSFSADEAMRLCRDCLAALRSAAMANVQHGDICPENIIRVFEKQGVRNQANMYVPISWGRAVLEDRDSPAINLQFSSSHALQHGKLCPSSDAESIVYILYFICGGTMSLQDSIESALQWRERSWAKRLIQQHIGQVSALLKAFADYVDSLCGTPYPVDYDIWLKRLNKAVEGSADKGKMIEEVPITLRLEDAAESSGASGP 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2480 743 Gene3D Transferase(Phosphotransferase) domain 1 532 711 - -
Ssu1g2480 743 SUPERFAMILY Protein kinase-like (PK-like) 519 710 IPR011009 -
Ssu1g2480 743 PANTHER KINASE FAMILY PROTEIN 5 742 - -
Ssu1g2480 743 PANTHER KINASE FAMILY PROTEIN 5 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2480 Ssu-Chr1 68651628 68655720 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2480 - - gmx:100805045 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2480 1 68651628 68655720 Ssu1g2480 1 68651628 68655720 ECH