Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2449 ATGGGTACGGGTTCGGATTCCAATGGATGGAACCGTGCCCGAGGGTTGGCGGTTAAGACTCTGCTTCTCATTGGAGGCGCACTTCTCATTAAGCGACTCCGCAAGTCCACCACGCGCTGGGACCATGCTCATTTCGTCGCTAAGTCCCTCACTGGCGAAAAGCATTCGAAGGAGCAGGCTTCCAGAGACCCTGATAACTATTTCAATATTAGAATGCTTACATGCCCGGCAGCAGAGCTCGTGGATGGTTCCAAGGTCTTGTATTTTGAACAGGCTTTTTGGAGGAGTCCACAAAAACCCTTTCGGCAGAGGTTTTTTATGGTGAAACCTTGTCCTAAAGAGTTGAAATGTGATGTTGAGTTAAGTACATATGCCATTAGAGACATGGAGGAGTACAAAAATTTCTGTGATCGACCGAAGGATCAGCGTCCACAGCCGGAAGAAGTCATTGGGGATATTGCAGAACATTTGACAACAATACATCTTAAGCGTTGCCCACGTGGAAAACGTTGCTTATATGAAGGTTCAACCCCACCTGATGGATTTCCTAATTCATGGAATGGGGCAACCTGCTGTACTTCAGAACTTGCAGTTATGAAGAACAATGAGATACATACCTGGGATAGGGGTTATGATGATGATGGAAATCAAGTTTGGGGACAAAAAGAAGGCCCGTATGAGTTCAAGCCTGCACCAACCTCTAGTTTTAATGATATGTTTTCTCCCTTGAATTTCCCCCCTCCACCATCCATGGAGAGAAGAATAGAGGGTTCATTTGTGTTGCAAGAATAA 792 0.4571 MGTGSDSNGWNRARGLAVKTLLLIGGALLIKRLRKSTTRWDHAHFVAKSLTGEKHSKEQASRDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFFMVKPCPKELKCDVELSTYAIRDMEEYKNFCDRPKDQRPQPEEVIGDIAEHLTTIHLKRCPRGKRCLYEGSTPPDGFPNSWNGATCCTSELAVMKNNEIHTWDRGYDDDGNQVWGQKEGPYEFKPAPTSSFNDMFSPLNFPPPPSMERRIEGSFVLQE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2449 263 Pfam CpeT/CpcT family (DUF1001) 46 229 IPR010404 GO:0016829|GO:0017009
Ssu1g2449 263 PANTHER BNAA01G14430D PROTEIN 5 263 - -
Ssu1g2449 263 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 5 263 IPR010404 GO:0016829|GO:0017009
Ssu1g2449 263 CDD CpcT 46 231 IPR010404 GO:0016829|GO:0017009
Ssu1g2449 263 Gene3D CpcT/CpeT domain 41 238 IPR038672 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2449 - - gmx:100800615 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2449 1 68140492 68143790 Ssu1g2449 1 68140492 68143790 ECH