Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2439 ATGGAAAGCGTGGATGGGAATGGGAGCAGCGAAGTGGAAAACGACGCGGAAATGAAGCTATTGAGAGATAGATTCAGGCTCTCCGCAATCTCCATCACCGAATCTCAAGCAAAACAAAACGGCATGGCAGTGTCAAAAGTCGTAGTCACTTGCATCGCGGATTTGGCCTTCAAATATACGGAGCGGGTGGCGAAGGATCTTCATCTATTTGCGCAGCATGCGAATCGTAAATCTGTAAATATGGAAGATGCGATACTTTGTGCGCATAGGAATGAACATTTATCTGGCTTGTTGAGGACCTTCTCCAATGATTTAAAAGCCAAAGATCCGCAATctgagaggaagagaaagaaagaagccAAAAAAAACGACAAAGGAACCGCTTAG 387 0.4186 MESVDGNGSSEVENDAEMKLLRDRFRLSAISITESQAKQNGMAVSKVVVTCIADLAFKYTERVAKDLHLFAQHANRKSVNMEDAILCAHRNEHLSGLLRTFSNDLKAKDPQSERKRKKEAKKNDKGTA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2439 128 PANTHER CORTISTATIN 7 127 - -
Ssu1g2439 128 MobiDBLite consensus disorder prediction 106 128 - -
Ssu1g2439 128 Pfam CENP-S protein 23 94 IPR029003 GO:0071821
Ssu1g2439 128 MobiDBLite consensus disorder prediction 99 128 - -
Ssu1g2439 128 SUPERFAMILY Histone-fold 43 92 IPR009072 GO:0046982
Ssu1g2439 128 PANTHER CENTROMERE PROTEIN S 7 127 - -
Ssu1g2439 128 Gene3D Histone, subunit A 2 121 IPR009072 GO:0046982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2439 K11511 - gmx:100798682 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2439 1 67864490 67865803 Ssu1g2439 1 67864490 67865803 ECH