Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2423 ATGGCAGCATCACCAGGCAAATTTGTGCAAACTGGACCCAGAATTACTAGCATGGCCAACTATGAGGTGAACTTGTTGGTTGGAGAAGATCTAAGTAATTGCATGCAAATTGATGTTCTTAAATCTGATAGAAATAATGCTCTAAAGCTTTCAAAAGAATCACATATTTCAAGTATGTGTAAAGATGGTAAGTTGAAGATTGACCCTGTGGATCAAATTGGCAAGTTGTCAGTCAATGCAAGGCAAACTATGCAGACACCTATTTCTAAGACTGTAGGTTTTCAAATAAGAGAATCAACTCCTCATGTTAACggttttggtggaaatggatATCCAACAACTGTGTTTGAGCCACAAGCTAGAAAGCGTTTATTGTCACCTTTGAATGGGATGTTGCTTGCAAATCATTTTAAAGGTGATCCACTAAACATTGGTGGTGGTATTTATCAAAGTTGTTCAAAGGCTAATGATGATAATTCTAATGCTTCACACGAGTATAAGAAGGTTCATTTTGGAAACGACAATCATATTCACTCAATGATCTGGTCTACATCTTGTTTTCAGgaatttacaaatttatcctATAATAACCCTACTATAAACCATGCTGTATCTAGTCATTACCATTCACGTTGCAAATATGCAGAACCATGGTCTTACAAGCATTTCAAATCATCTCCAGCACTTAATTTTTCTGAAGAAACAACTAAAACAAGGTCTCAAACAGCTGCATTGTCTATACCACAAGAAAAGGTGTCATCGCCTCTCTTCCCTTTGTCTCCTCTagGCATTTTATATGCACACGAGATACCAAGTAAATCACAGATCAATTCCAACAATATGCAGCAAAAGTCTAACTGGTTTACTCCTGATGACATGATTGATATGAAAGAGTATTGGACTCATCCTGAAAGCTTTCCTCCTCAGCATGCCAAATTATATGGAATTGTGAGTAGACTGCCCATTAGAAGGTCCCTAGTTGGTTCATTTGAGGAATCTTTGTTATCTGGTCGTCTACTATCTGGGAAAGTTAGTCAGAAAATTGAAGGCTTTCTTGCCATGCTAAATGTAACTGGCGGCAATTTCTCACCTCAATCACAAAAGATACCATTTGCAGTAACTAGCGTGGATGGAGACAAGTACTTACTTTATTATTCATCAATTAATCTTTCAGGAAAGCTATTATCAAGCAAGTCTAGAGTTGCTAAATTCCAGAGAACCCTTAGCATGGATGAATCACGGTATGAAAAAACTCGTCTATGCATACCTATGAAAGGACGTATTCAACTGGTTCTTAGTAATCCAGAGAGGACACCAATCCATACCTTCTTTTGTAATTATGATTTGAGTGACATGCCAGTTGGTACCAAGACATTCTTACGGCAAAAGGTCATTTTAACTGCATCTAGATCGATGTCTATGATGGGAAAAGAAAGCCAAACAGATTCTGAAATCAGAGTTGATGCCAAGTCTTCATTGATCTCAGATACTAGTCATAAAGCAAAAGATCATCTCACCTCCAAATGTGGAGAGTTTGATAGTTTTACATGTTCAAAGGCTGGCATTTTGCTTTATGCTCTTCATCTTCGCTTTATGTGCCCCTTGCCTAAAAGACGTTCAAGGTCTGTGCATAAGTGCAAATCTGATCCTGTCTCTACAGAAGTGAGAAATATTATGGATATTGAACATGAAAGAAGCTTTTACTTGTATGATGATATAAGGGTAGTGTTTCCTCAACGTCATTCAGATTCTGATGAGGGCAAGGTATGCAAATATATATGTGAAGTGGTTGTAACACATTCATGCACTAATAGCTTGGGAAATTTATGGCTCATGGTATATTTTATGTCCTTAAAAATCATTCATGGGTAA 1872 0.3659 MAASPGKFVQTGPRITSMANYEVNLLVGEDLSNCMQIDVLKSDRNNALKLSKESHISSMCKDGKLKIDPVDQIGKLSVNARQTMQTPISKTVGFQIRESTPHVNGFGGNGYPTTVFEPQARKRLLSPLNGMLLANHFKGDPLNIGGGIYQSCSKANDDNSNASHEYKKVHFGNDNHIHSMIWSTSCFQEFTNLSYNNPTINHAVSSHYHSRCKYAEPWSYKHFKSSPALNFSEETTKTRSQTAALSIPQEKVSSPLFPLSPLGILYAHEIPSKSQINSNNMQQKSNWFTPDDMIDMKEYWTHPESFPPQHAKLYGIVSRLPIRRSLVGSFEESLLSGRLLSGKVSQKIEGFLAMLNVTGGNFSPQSQKIPFAVTSVDGDKYLLYYSSINLSGKLLSSKSRVAKFQRTLSMDESRYEKTRLCIPMKGRIQLVLSNPERTPIHTFFCNYDLSDMPVGTKTFLRQKVILTASRSMSMMGKESQTDSEIRVDAKSSLISDTSHKAKDHLTSKCGEFDSFTCSKAGILLYALHLRFMCPLPKRRSRSVHKCKSDPVSTEVRNIMDIEHERSFYLYDDIRVVFPQRHSDSDEGKVCKYICEVVVTHSCTNSLGNLWLMVYFMSLKIIHG 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2423 623 Pfam Domain of unknown function (DUF4210) 326 371 IPR025261 -
Ssu1g2423 623 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 10 277 - -
Ssu1g2423 623 PANTHER GH03947P 299 589 - -
Ssu1g2423 623 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 299 589 - -
Ssu1g2423 623 PANTHER GH03947P 10 277 - -
Ssu1g2423 623 SMART DUF4210_2 326 385 IPR025261 -
Ssu1g2423 623 Pfam Chromosome segregation during meiosis 523 589 IPR033473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2423 Ssu-Chr1 67507095 67511013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2423 - - gmx:100793556 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2423 1 67507095 67511013 Ssu1g2423 1 67507095 67511013 ECH