Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2407 ATGATAGGGAAAGGTAAAAGTAATAAGAAGGCCAAGGCAGAACCTACTAAGCAGGACATGCATGCAGTAGTCGTTGATATTCTGAAGGAGGTAGATTTCAATACTGCAACTTTGTCTGATATCCTCAGGCAACTTGGTACCCACTTTGGTCTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGACGTAATTAATAACATGTCTGATGAGGAAGATGAAGGAGAAGAAGCTGAGAATGATGGTGATGCAGataaagatgatgatgatgatgatgatgatgcgtGA 297 0.3569 MIGKGKSNKKAKAEPTKQDMHAVVVDILKEVDFNTATLSDILRQLGTHFGLDLMHRKAEVKDIITDVINNMSDEEDEGEEAENDGDADKDDDDDDDDA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2407 98 MobiDBLite consensus disorder prediction 69 98 - -
Ssu1g2407 98 PANTHER OS01G0924900 PROTEIN 3 93 - -
Ssu1g2407 98 SUPERFAMILY DEK C-terminal domain 9 69 - -
Ssu1g2407 98 Pfam DEK C terminal domain 15 67 IPR014876 -
Ssu1g2407 98 Coils Coil 64 84 - -
Ssu1g2407 98 Gene3D - 7 70 - -
Ssu1g2407 98 PANTHER DEK PROTEIN 3 93 IPR044198 GO:0003677|GO:0006325
Ssu1g2407 98 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2407 Ssu-Chr1 67199926 67200404 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2407 K17046 - gmx:100788998 138.272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2407 1 67199926 67200404 Ssu1g2407 1 67199926 67200404 ECH