Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2403 ATGGGCAAGTTGTGGACCTTGATCATCCAACTTCATTCTGTTGCTGGGCCGGTTTTGACGCTATTGTACCCTTTgtATGCATCGGTGGTAGCAATAGAGAGCAAATCCAAGTTGGATGACGAGCAATGGCTCGCTTATTGGATCATCTATTCGTTCCTCACCCTTGTGGAAATGGTTCTTGAACCCATCTTACAGTGGATACCAATTTGGTACGACGTGAAGCTATTGACGGTGGCATGGCTGGTGTTGCCGCATTTCGAAGGAGCTGCGTACTTGTATGAAAGGTTCGTGAGAGAGCACATACGGAAACATATAACGGAGAGGGAACAGCATCAGGTCCAGCACCAGGAACAAAGCAAAAAGTCTCCCAACGGGGGCAAGGCTAAGAAGAAGTTCGTCGAATTCGTCACGCCCAAGAAAGGGGATCAGGAGGCGTATTGA 441 0.483 MGKLWTLIIQLHSVAGPVLTLLYPLYASVVAIESKSKLDDEQWLAYWIIYSFLTLVEMVLEPILQWIPIWYDVKLLTVAWLVLPHFEGAAYLYERFVREHIRKHITEREQHQVQHQEQSKKSPNGGKAKKKFVEFVTPKKGDQEAY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2403 146 PANTHER HVA22-LIKE PROTEIN 1 146 - -
Ssu1g2403 146 MobiDBLite consensus disorder prediction 108 146 - -
Ssu1g2403 146 Pfam TB2/DP1, HVA22 family 24 99 IPR004345 -
Ssu1g2403 146 PANTHER HVA22-LIKE PROTEINS 1 146 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2403 Ssu-Chr1 67053352 67054713 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2403 K17279 - gmx:100305818 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2403 1 67053352 67054713 Ssu1g2403 1 67053352 67054713 ECH