Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2384 ATGGGAGGTGGCAAACGCAGATCCTCCATTCTCATGCTCCTTCTCTGTGTGTTCCTTTGTGTTTTTGCAACGGCACAACAGCAGCAACCTATAAAAACCGTTGTTGTTTTGGTTATGGAGAACCGTTCCTTTGACCACATGCTGGGGTGGATGAAAGAGAGCGTCAACAATTTAATCAATGGGGTCACGGGATATGAATGCAACCCGGTTTCTACTAAAAGTCCCAGGCAAGATTCAATTTGCTTCACCGACGATGCGGAGTTCGTGGATCCGGATCCGGGGCACTCATTTGAGGATGTGTTGCAACAGGTGTTCGGTTCTGGTTCAGGTTCCATCCCTTCCATGAATGGATTTGTGGAACAAGCATTGTCCGTGTCGCAGAACCTCTCTGAGACTGTGATGAAAGGGTTTAAACCCCAGTCTCTGCCGGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCGGGTCCAACACAACCCAATAGGCTTTTTGTGTACTCAGCAACCTCTCATGGTTCAACAAGTCATGTCAAGAGGCAGTTAGCCACAGGAAACCTTAGGAAATTGAAGTACATATTCAAGTTCCATCAGTATGATTTAAAGTTCAAGAGAGATGCTAGAGATGGGAAGCTTCCACCCTTGACTGTGATTGAGCCTAGGTACTTTGACTTGAAGGGCTTGCCTGCGAATGATGACCACCCATCTCATGATGTTGCACATGGGCAAATGCTGGTTAAGGAGGTTTATGAGGCTCTAAGAGCAAGCCCTCAGTGGAATGAAACACTTCTGATCATTACATATGATGAACATGGTGGATTTTTTGATCATGTGAAGACTCCTTTTGTCAACATTCCTAGTCCAGATGGGAACACCGGACCTGCTCCCTATTTCTTCAAGTTTGATAGGTTAGGCGTTCGGGTGCCCACTATTATGGTCTCTCCTTGGATCAAGAAAGGGACTGTGATAAGCGGCGCCAAAGGACCCGCTGATAACTCCGAATTTGAGCACTCTTCTATTCCTGCCACCATAAAGAAGATGTTCAACCTTTCCTCTAACTTTTTGACTCACAGAGATGCATGGGCTGGGACATTTGAGCATGTTGTTGGGGAGTTAAATTCACCCAGAACAGATTGCCCAGTGACTTTGCCGGACGTGACACCTCTAAGGAGCACTGAAGCAAAAGAAAATGCAGGCCTATCTGAGTTTCAGAGTGAGGTAGTTCAATTGGCAGCTGTTCTTAATGGGGACCATTTCTTGAGCAGTTTCCCTGATGAAATGAGCAAGAAGATGAGTGTGAAGGAAGCTCATGAGTACGTTCGAGGAGCTGTTTCAAGGTTCATAAGAGCCAGCAAAGAGGCCATCAAGTTAGGGGCCGATGAGTCTGCTATTGTGGATATGAGATCCTCTCTCACTACTAGATCTTCAATTCATAACTAA 1461 0.4559 MGGGKRRSSILMLLLCVFLCVFATAQQQQPIKTVVVLVMENRSFDHMLGWMKESVNNLINGVTGYECNPVSTKSPRQDSICFTDDAEFVDPDPGHSFEDVLQQVFGSGSGSIPSMNGFVEQALSVSQNLSETVMKGFKPQSLPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLATGNLRKLKYIFKFHQYDLKFKRDARDGKLPPLTVIEPRYFDLKGLPANDDHPSHDVAHGQMLVKEVYEALRASPQWNETLLIITYDEHGGFFDHVKTPFVNIPSPDGNTGPAPYFFKFDRLGVRVPTIMVSPWIKKGTVISGAKGPADNSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEHVVGELNSPRTDCPVTLPDVTPLRSTEAKENAGLSEFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVRGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSIHN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2384 486 Gene3D Alkaline Phosphatase, subunit A 232 405 IPR017850 -
Ssu1g2384 486 Gene3D Alkaline Phosphatase, subunit A 22 191 IPR017850 -
Ssu1g2384 486 PANTHER - 193 486 - -
Ssu1g2384 486 PANTHER - 9 192 - -
Ssu1g2384 486 Pfam Phosphoesterase family 193 357 IPR007312 GO:0016788
Ssu1g2384 486 Pfam Phosphoesterase family 31 186 IPR007312 GO:0016788
Ssu1g2384 486 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 9 192 IPR007312 GO:0016788
Ssu1g2384 486 SUPERFAMILY Alkaline phosphatase-like 248 356 IPR017850 -
Ssu1g2384 486 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 193 486 IPR007312 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2384 Ssu-Chr1 66347645 66349904 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2384 11 481 Acyl Lipid Metabolism Gene Families AT3G48610 75.299 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2384 K01114 - gmx:100786332 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2384 1 66347645 66349904 Ssu1g2384 1 66347645 66349904 ECH