Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2370 ATGGGGGATCAATGTGAGAGCGAGAGTAAGAGAATGGGAACAAAgaagcagaagaagaagaaaagcgaGTTCGAGTTCTGCAAGGTCTGCAATATAAACCACGACCAAGGTCTCCGCCACAAGTACTTCCCTAACCACAAGAAATCCCTCTCCACCTTCCTCTCTCGCTTCCGCAAAAAACTCTCCAACGTTCGCTCCTTCCTCAACGCCCCTATCCCTCTCAATCCCCAACTCGCCTCTCGTAACCGCATCTGGTGCGTCTTCTGCGACCAAGACATCAACGAACACTCCAGTTCCTTTGCCAGCGCTAATGCGATTCGCCACCTGGCGAGTGCCGAACACGTGAAGAATTTGAAGCACTTCTTCTGGAAATACGGTGTCGCCACGGATCAGTTGGACGCGTTTATGGTTTCTGATGATGATGTGCTAAGGACTCTCCGAGTCGCCAATGTCGCTACCTCTTCGGAAGCGTGCTCTGGTGCAAATCCTTCTGCTTTGCAAGCTTTTGCGGTTGAAAGGAGAAGCCATTCTCTCCCTCATGATGGTAGACAATGGTCGAGTGATGGATACTCACGTAGTAAACAGGTGCATGACAATGGTAGAATGGTAAGCGGAGAGAGCAATCATCAGGGTCTACAAATGATCACTCAGATCTCTTCTGTGCCTACTGAAATTGCTGGTGGAAATGTTCATTCTGGAGCACCTCCAGTGTGGCTTGAAGCAACTGAGGTAGTTCAGATGCATTCTGAGTCTGTTTTGGGTGACCCTGTCTCCCATTCAAACAAGTTAGGAAAGTCCAAGAAGTTGAATCCAGAACGGGTGGGAGCAGCTTGGGCTGAAAAGAGAAAGATTGAAATGGAGAAGGAAAAGAGGGGAGAGACTGTAAGGAATGAGTGTGATGCCAACTGGCTTCCTAATTTTGGTAGAGTATGGCAATCTGGTAGCAGAAAAGAATCCAGAAAAGAATTTGAGAGGGAGAAACAGAAGttaaatgttgaaaatcaatCTGAGATGCCAATCAAGATACAGCCTTATGTCAGCAAAAGAATGCGGATGGATAATGGAGGTGATTATGCAAGCGGGTGA 1086 0.4613 MGDQCESESKRMGTKKQKKKKSEFEFCKVCNINHDQGLRHKYFPNHKKSLSTFLSRFRKKLSNVRSFLNAPIPLNPQLASRNRIWCVFCDQDINEHSSSFASANAIRHLASAEHVKNLKHFFWKYGVATDQLDAFMVSDDDVLRTLRVANVATSSEACSGANPSALQAFAVERRSHSLPHDGRQWSSDGYSRSKQVHDNGRMVSGESNHQGLQMITQISSVPTEIAGGNVHSGAPPVWLEATEVVQMHSESVLGDPVSHSNKLGKSKKLNPERVGAAWAEKRKIEMEKEKRGETVRNECDANWLPNFGRVWQSGSRKESRKEFEREKQKLNVENQSEMPIKIQPYVSKRMRMDNGGDYASG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2370 361 MobiDBLite consensus disorder prediction 182 197 - -
Ssu1g2370 361 Pfam Coiled coil protein 84 26 143 IPR028015 -
Ssu1g2370 361 Pfam Coiled coil protein 84 194 329 IPR028015 -
Ssu1g2370 361 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 84 18 158 IPR028015 -
Ssu1g2370 361 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 84 179 354 IPR028015 -
Ssu1g2370 361 MobiDBLite consensus disorder prediction 178 197 - -
Ssu1g2370 361 MobiDBLite consensus disorder prediction 314 332 - -
Ssu1g2370 361 MobiDBLite consensus disorder prediction 314 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2370 - - pvu:PHAVU_009G166300g 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2370 1 66197365 66200678 Ssu1g2370 1 66197365 66200678 ECH