Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2367 ATGGAAGAGATTATTGGAAAAAAGCGCTTCaatatgattttggtgattgtGTGCTTCACCAACTTGAGCATCGCTTTTGCTCATAATCACATCAACTTTGGAGAGCAGCCACTGGCCAAGATAGCCATTCACAAGACCATTTTGGCGCTCCACAGTTCCGCTTCCATTACAGCAGTCCCCTTTGTGCTGGGCATTAAGGGCGAGGATACCGAATGGGTGACTGTAGAGCTAGAGTCCCCAGAACCGTCTGTAGATGACTGGGTGGGAGTTTTTTCTCCAGCAAACTTCGATTCATCAACATGTCCATACACCGGCGGCATTGGCTGGGTAGAGGAACCATACATATGCTCAGCCCCAATAAAGTACAAGTATGCGAACCACTCTAATCCAAACTATGCAAAGACCGGGAAAGCTACTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTCGCACTATTTTCAGGTGGATTATCAGAACCTAGACTTGTGGCAGTTTCCAATTCCATATCATTTGCAAATCCTAAAGCACCTGTCTATCCGCGCCTAGCTCTTGGAAAGTCTTGGGATGAAATGACAGTTACATGGACAAGTGGATATGACCTAGATGAAGCTGTGCCTTTTGTTGAATGGGGTCCCAAGGGAGGAAAGCAAACACGATCTCCTGCTGGAACATTGACATTTAATCGTAACAGCATGTGTGGTGAGCCTGCACGAACTGTTGGCTGGCGTGACCCTGGTTTTGTACACACAAGTTTCCTAAAAGAACTGTGGCCAAATTTTAGGTACACTTACAGGGTGGGGCATATGCTGTCTAACGGTTCTTACGTATGGAGTAAGAAGTATTCGTTCAAGGCATCCCCATATCCTGGACAGAACTCTTTGCAACGTGTTATCATATTTGGTGACATGGGAAAGGCTGAGCGTGATGGTTCAAATGAATATGCCGATTATCAACCTGGTTCACTCAACACCACAGACCAACTCATCAAGGATTTGGACAATTATGACATTGTTTTCCACATAGGAGATATGCCTTATGCAAATGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTGCAAGAAATTTCGTCTACAGTACCGTACATGATTGCAAGTGGAAATCATGAACGCGACTGGCCAAACACTGGATCTTTTTACGATACTCCAGATTCTGGTGGAGAATGTGGAGTTCCTGCAGAAACCATGTATTATTTTCCTGCTGAGAATAGAGCCAAATTCTGGTATGCAGCAGATTATGGCATGTTTCGTTTCTGTATAGCAGATAGTGAGCATGACTGGAGAGAAGGATCAGAACAGTACAAATTCATTGAGCATTGTCTTGCAACAGTAGATAGAAAGCATCAACCATGGTTAATCTTTTCAGCTCATCGTCCCCTTGGGTATTCCTCTAATCTTTGGTATGGCATGGAGGGCTCATTTGAAGAGCCCATGGGAAGGGAAACTTTGCAGAAGCTTTGGCAAAAGTACAAAGTAGACATTGCATTTTATGGTCACGTCCATAACTATGAAAGAATATGCCCCATTTATCAGAATCAATGTGTGAATTCAGAAAAACATCACTACTCTGGCACCGTGAATGGAACAATTCATGTTGTAGTTGGTGGAGGGGGAAGTCACTTGTCAGACTTCACCTCTGCACCCCCTGTTTGGAGTCTCTACAGGGACCGTGACTACGGATTTGGCAAACTGACAGCATTCAATCATTCATATCTCTTGTTTGAGTACAAGAAAAGTAGTGATGGAAAGGTCTACGACTCCTTTACCATTTCAAGAGACTACAGAGATGTTCTGGCCTGTGTGCACGATGGTTGTGAGAAAACTACTCTAGCAACCTGA 1872 0.4375 MEEIIGKKRFNMILVIVCFTNLSIAFAHNHINFGEQPLAKIAIHKTILALHSSASITAVPFVLGIKGEDTEWVTVELESPEPSVDDWVGVFSPANFDSSTCPYTGGIGWVEEPYICSAPIKYKYANHSNPNYAKTGKATLKFQLINQRADFSFALFSGGLSEPRLVAVSNSISFANPKAPVYPRLALGKSWDEMTVTWTSGYDLDEAVPFVEWGPKGGKQTRSPAGTLTFNRNSMCGEPARTVGWRDPGFVHTSFLKELWPNFRYTYRVGHMLSNGSYVWSKKYSFKASPYPGQNSLQRVIIFGDMGKAERDGSNEYADYQPGSLNTTDQLIKDLDNYDIVFHIGDMPYANGYISQWDQFTAQVQEISSTVPYMIASGNHERDWPNTGSFYDTPDSGGECGVPAETMYYFPAENRAKFWYAADYGMFRFCIADSEHDWREGSEQYKFIEHCLATVDRKHQPWLIFSAHRPLGYSSNLWYGMEGSFEEPMGRETLQKLWQKYKVDIAFYGHVHNYERICPIYQNQCVNSEKHHYSGTVNGTIHVVVGGGGSHLSDFTSAPPVWSLYRDRDYGFGKLTAFNHSYLLFEYKKSSDGKVYDSFTISRDYRDVLACVHDGCEKTTLAT 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2367 623 PANTHER PURPLE ACID PHOSPHATASE-RELATED 10 622 - -
Ssu1g2367 623 Gene3D - 293 607 IPR029052 -
Ssu1g2367 623 Pfam Calcineurin-like phosphoesterase 299 514 IPR004843 GO:0016787
Ssu1g2367 623 Pfam Purple acid Phosphatase, N-terminal domain 184 287 IPR015914 GO:0003993|GO:0046872
Ssu1g2367 623 Pfam Fn3-like domain from Purple Acid Phosphatase 56 176 IPR040974 -
Ssu1g2367 623 PANTHER PURPLE ACID PHOSPHATASE 10 622 - -
Ssu1g2367 623 Gene3D - 179 292 - -
Ssu1g2367 623 CDD MPP_PAPs 298 603 IPR041792 -
Ssu1g2367 623 Pfam Iron/zinc purple acid phosphatase-like protein C 539 598 IPR025733 -
Ssu1g2367 623 SUPERFAMILY Purple acid phosphatase, N-terminal domain 159 290 IPR008963 GO:0003993|GO:0046872
Ssu1g2367 623 SUPERFAMILY Metallo-dependent phosphatases 299 614 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2367 Ssu-Chr1 66105790 66112183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2367 52 601 Miscellaneous Gene Families AT1G13900 29.070 5.40e-59 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2367 K22390 - gmx:100775672 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2367 1 66105790 66112183 Ssu1g2367 1 66105790 66112183 ECH