Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2366 ATGGCACCGCACGATCTCCGGCGTCCGTTCAAGCGACCAGCAATCTCCGATCAAGAGAGGCGCAGGGAACAGTCTCTGCTCCGCCAAGCACAGAATCGCCAAGACGCTCAGCGCCACGCGCGCTGCTTGGCCTCCGCCGCCCTCTCTCTCCCATCCCAAACCGCCGAACCCGAACCCGACTCCGAACCCAAACCCGAACTCGAACTCGAACTCGCGGAAATCCCGGAGTCTTCGCACGAGAACATCGACGTCCTCGGAGCCTCGAAGCTGAAAGCCGCGGAAGCCCGCAAGTGGTTCGCGAAACAGCTCATGCTCCCCGAGTGGATGATCGACATCCCCAACAACCTCTCCCAAGACTGGTTCGTCTTCGCTCGCCCTTCCGGGAAACGGTGTTTCGTCGTTTCGTGTAACGGAACGACGATAAGCCGTTTGCGGAACGGTTCCATTCTGCATCGTTTTCCCTCCGCGTTGCCGGGCGGGGCAAGGAAAAAGGATTCCGGTTCTTCTCAGTCTTACTCTATATTGGACTGCATCTTTCACGAGGTGGATCAGACTTATTACGTTATTGACATGGTTTGTTGGCGGGGCTACTCTCTGTCCGATTGCACTGCGGAGTTTAGGTTCTTCTGGTTGAACTCGAAGCTTGCGGAGACTGGTGCTTGTGAGCCTCCATCGCGTTATCACAAGTATAGGTTCAGTCTGGTTCCGGTGTATGCTTGTGACTCGAACGGCCTCTATGCTGCTTATACGGCACCAGTGCCTTATGTTAAAGATGGTCTTCTGTTTTCTAACAAGCATGCTCACTACCAGGCAGGAATTACGCCGTTAGCATTGGTTTGGAAGGATGAGAACTGTAGTCAATATGTTTTGGACACAGACAGTAAAGGACAGGTTCCGAACCAACAGCAGGTGGTTTTGGAGCTCCAAGAAGATGGAAAACTGACTACATCAGATGATCCTCCAGTGGTATTTGGCTTTTTAGATGGAAGCTTTATACAACAGTCAGGGCTGCATTCAGGATGTCTTCTACGGTTTTCAATTGGAGAGGGAGGATTAGTTTTGATGGATGGGAAGCTTGAGAAAGCTGATCTACATTATCTTAGCAAGGCCAACCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAACACAGTGTTCGACACTCTCCCCTCAAAATTGATGGTCTGTTGGAATCTGTCAGCTTACCGGTTGATCAGGAAAGCAAAACTTGTGATGTTGAGATGGATGGTTGA 1263 0.5139 MAPHDLRRPFKRPAISDQERRREQSLLRQAQNRQDAQRHARCLASAALSLPSQTAEPEPDSEPKPELELELAEIPESSHENIDVLGASKLKAAEARKWFAKQLMLPEWMIDIPNNLSQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSALPGGARKKDSGSSQSYSILDCIFHEVDQTYYVIDMVCWRGYSLSDCTAEFRFFWLNSKLAETGACEPPSRYHKYRFSLVPVYACDSNGLYAAYTAPVPYVKDGLLFSNKHAHYQAGITPLALVWKDENCSQYVLDTDSKGQVPNQQQVVLELQEDGKLTTSDDPPVVFGFLDGSFIQQSGLHSGCLLRFSIGEGGLVLMDGKLEKADLHYLSKANRARASADSFSKVMFQHSVRHSPLKIDGLLESVSLPVDQESKTCDVEMDG 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2366 420 Gene3D DNA ligase/mRNA capping enzyme 2 308 - -
Ssu1g2366 420 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 419 IPR017336 GO:0005634|GO:0005737|GO:0061015
Ssu1g2366 420 MobiDBLite consensus disorder prediction 1 28 - -
Ssu1g2366 420 CDD Snurportin-1_C 98 283 - -
Ssu1g2366 420 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 98 281 - -
Ssu1g2366 420 MobiDBLite consensus disorder prediction 1 66 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2366 K13151 - gmx:100801927 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2366 1 66100399 66104933 Ssu1g2366 1 66100399 66104933 ECH