Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2348 ATGGGGAAGCAAGAGAGCCACGGCGTCGTTTCCGATCTGATCGACTTCCTCAACGCTTCTCCAACGGCTTTCCACGCCGTCGACGAGGCAAAGAAGCTTTTGCGAAGCGCGGGATTCCACCAGCTCTCGGAGAAGGAACTGTGGGAACTGCAACCCGGCAGCAAGTACTTCTTCACCAGAAACCACTCCACCATCGTCGCCTTCGCTATCGGCAAAAGGTATGTTGCTGGAAATGGATTCTACATAATTGGCGCTCACACGGATAGTCCTTGTCTCAAACTCAAGCCTGTGACCAAGGTGGTTAAGGGTGGAATTTTGGAGGTTGGTGTTCAAACCTATGGGGGTGGTCTGTGGCACACGTGGTTTGATCGAGACTTGACCGTGGCGGGGAGGGTCATTGTGCGGGAAGAGAATGCCGGTTCTGTTTCGTACTCGCATCGCCTTGTTAGAATTGAGGAACCTATAATGCGGATCCCGACTTTGGCAATTCACTTGGACAGGAATGTTAATACTGATGGATTCAAATTCAACACGCAGACTCATCTTCTTCCCATCTTGGCAACAACACTGAAGGGTGAGCTCAATAAAGTGTCCTCTGAAAATGGTCCAGTTGAAAGTAAAACAGGTGCCAGCAATACGAAGCACCACCTTCTTCTCCTACAGTTGCTTGCAAGTAAGCTTGGGTGTGAACCAGATGACATTTGTGATTTTGAATTGCAAGCTTGTGATACACAACCAAGTACTATTGCTGGAGCTGCAAAGGAATTCATTTTTTCAGGACGGCTTGATAACCTCTGCATGTCATTTTGCTCGTTGAAGGCATTAATAGATGCTACATCCTCTGACAGCAGTCTTGAGGAAGAGACGGGTGTTAGAATGGTGGCTTTGTTTGACCATGAGGAAGTTGGATCTGACTCTGCACAAGGAGCTGGCTCTCCTGTTATGCTAAATGCTGTCTCTAGGGTTACCAATTCCTTCAGCTCAAATTCCAACCTTCTGGAGAAAGCGGTACAAAGAAGCTTCCTTGTATCTGCCGATATGGCACATGCACTACACCCAAATTACATGGACAAGCATGAAGAAAATCATCAGCCCAAACTGCACGGAGGACTTGTCATTAAAACCAATGCAGGCCAACGCTATGCAACCAATGTTGTCACATCCTTCATTTTCAGGGAGATAGCATCAAAACATAACCTTCCCGTTCAGGACTTTGTGGTGCGCAATGACATGGCTTGTGGTTCAACCATTGGTCCAATTCTTGCTAGTGGCGTAGGTATTCGCACTGTTGATGTAGGTGCCCCGCAGTGGTCAATGCATAGCATACGAGAAATTTGTGCTGTTGATGATGTGAAGTATTCATATGAACACTTCAAGGCTTTTTACCAAGAATTCTTTCATCTCGATGGTAAGATGGTCGTGGACATATAG 1431 0.4689 MGKQESHGVVSDLIDFLNASPTAFHAVDEAKKLLRSAGFHQLSEKELWELQPGSKYFFTRNHSTIVAFAIGKRYVAGNGFYIIGAHTDSPCLKLKPVTKVVKGGILEVGVQTYGGGLWHTWFDRDLTVAGRVIVREENAGSVSYSHRLVRIEEPIMRIPTLAIHLDRNVNTDGFKFNTQTHLLPILATTLKGELNKVSSENGPVESKTGASNTKHHLLLLQLLASKLGCEPDDICDFELQACDTQPSTIAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSDSSLEEETGVRMVALFDHEEVGSDSAQGAGSPVMLNAVSRVTNSFSSNSNLLEKAVQRSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKTNAGQRYATNVVTSFIFREIASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQWSMHSIREICAVDDVKYSYEHFKAFYQEFFHLDGKMVVDI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2348 476 PANTHER ASPARTYL AMINOPEPTIDASE 3 475 - -
Ssu1g2348 476 Pfam Aminopeptidase I zinc metalloprotease (M18) 16 462 IPR001948 GO:0004177|GO:0006508|GO:0008270
Ssu1g2348 476 Gene3D Zn peptidases 12 462 - -
Ssu1g2348 476 CDD M18_DAP 12 463 - -
Ssu1g2348 476 SUPERFAMILY Aminopeptidase/glucanase lid domain 92 240 - -
Ssu1g2348 476 Gene3D Aminopeptidase i, Domain 2 91 246 IPR023358 GO:0004177
Ssu1g2348 476 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 80 96 IPR001948 GO:0004177|GO:0006508|GO:0008270
Ssu1g2348 476 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 113 133 IPR001948 GO:0004177|GO:0006508|GO:0008270
Ssu1g2348 476 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 297 315 IPR001948 GO:0004177|GO:0006508|GO:0008270
Ssu1g2348 476 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 340 356 IPR001948 GO:0004177|GO:0006508|GO:0008270
Ssu1g2348 476 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 152 169 IPR001948 GO:0004177|GO:0006508|GO:0008270
Ssu1g2348 476 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 429 444 IPR001948 GO:0004177|GO:0006508|GO:0008270
Ssu1g2348 476 SUPERFAMILY Zn-dependent exopeptidases 5 463 - -
Ssu1g2348 476 PANTHER ASPARTYL AMINOPEPTIDASE 3 475 IPR001948 GO:0004177|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2348 Ssu-Chr1 65835799 65841006 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2348 K01267 - gmx:100781379 864.759