Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2347 ATGGAAAGCAACCAAAAAATTTTGGGGCAGGATTCCCCTGTTGACGTCGTACGACACACCAAGCCAATAGTGGAACTCCAACACACGACAATTGATAATCATTGTACTCTTTTGACGCCAGCTCTGGGAGAAAGAGAAACTGCTAAGCATGATGACGTCACCAAAGTGGgATCCTTGTTGCTAGAGCGGTCCTCCACCTCCTCGTGCTCCTGTCGTCATTGCGCTATCATTTTCGCTCTCCTCATCGTTGTCCCAATCATTGAGCTCGATCTTGAGGAAATTATTCTCCAAAGAGCGGTTCGGCAACGACAGAGGTATACGATGGTGGCTTGGGTTTCTTTTGGTGTAGGTTTGGGTTTTGCAAGCAGAGGTGGGGTGTGGTGGTTCGATGGCAACAAAGGTTTCGGTGGTGGCATCCTAGCCAAGACCGTGGATGAAGATTTTGCAGTGCGTGGGGTTAGCAGTGGTGGCCCACAGATTCAATCTGCCATGTCGTGGTGTTTGGAAGCAGCCTCACAAAGGAACTTTGTGATCTTGCCCATGTCAAGGGGTTCTAGAACGAAATCCGCATCTTGTTGCCATGTTTCAATTTGGTTGAACCAAAAGAGGTTGGCTTTTGAGAAAGTGGTCCTGGATGGTTTAGTTAGGATTGAGGCAGAGGATAATGTCATTTTGCTTCTTATCTGTGACAAGAGTGTATTtgatagaagaaaaatgaaagaaaataggaagAGGAAAGAGGAAATAGAAGAGAGACAGGAAATGAGGTGGTCCACGCACTTACCCAACACATTACTGCTACGCACGTGCCTCGCGCCACGTCTCCCTCCTCTCGCACGTGTCTCCCCCACAGTTCCTATAAACCCATCCTCCCGCTTCCGTCTCCGCTCCGTGCATTCCCTTGTTTCTGGAACCTCCTTCCCCAGTCACCCTCACTTTCTCAACCACATCACACAACACATCAAAGTGGAAACTAAGGGAGGGTGTTGCATCGCTCGGTGTGCAACTCGTGCACACCACATGTCCAAGGTGGACAGGATAATGTTACGGTTTCGCCCCATCGCTCCCAAACCCCTCCCCGCCGCAGCCCTCTCCGACGCTTCCTCGTCGGAGAGCGGCGCCGACGCGTTCTCCAGATGCGGCGGAGCGAAAAGAAAGCACGCGAAGGACAACGGCAAGCGGTGCAGTCGAGGGATCCGCCGGAGGAGAAACGCGCCTCCTCCACCGGCGGTGACTCTCCCGCTGCTGCCGGAGACTCCGGATCCGAAGAAAACAACCCCCGAAGCAAAGAGCAAGACCGTGCCGTTGTGGCTGAGCTTCGAGAACCGCGGCGGTGCTGTTTCGGAGAAGGTGGATCGCGGGTGGTACCCGCCTGCGGCGGGATCGGTGGTGACGGTGGAGTGCGTGATGGACACGTGGCAgcaggaggaggaggaggggtTAGGGTTGGGGAGTGGGGACGAGGAACGGAAGGTGAAGCTGGGGGAGGACACGTGTCCGGGGTTCATATCGGACGGTTACGGGAGGGTGACGTGGACGAATGGGGCGTATAGGGAAGCGGTGGGTGAGGGAGGAGTATGGCTGGCAATGAAGGTGACCGTACCGTATCCGTACCGAGGGTTCACGTGCAGGGTGAGGGTGCAGTACGCGTGTGGGAAAGAGAGAACGGTGCCATGTGATGTTTGGAGAATGGACAGTGGTGGATTCGCGTGGAGATTAGACGTTAAGGCTGCTCTTAGCCTGAGCTTAGCTTTGTAA 1758 0.5284 MESNQKILGQDSPVDVVRHTKPIVELQHTTIDNHCTLLTPALGERETAKHDDVTKVGSLLLERSSTSSCSCRHCAIIFALLIVVPIIELDLEEIILQRAVRQRQRYTMVAWVSFGVGLGFASRGGVWWFDGNKGFGGGILAKTVDEDFAVRGVSSGGPQIQSAMSWCLEAASQRNFVILPMSRGSRTKSASCCHVSIWLNQKRLAFEKVVLDGLVRIEAEDNVILLLICDKSVFDRRKMKENRKRKEEIEERQEMRWSTHLPNTLLLRTCLAPRLPPLARVSPTVPINPSSRFRLRSVHSLVSGTSFPSHPHFLNHITQHIKVETKGGCCIARCATRAHHMSKVDRIMLRFRPIAPKPLPAAALSDASSSESGADAFSRCGGAKRKHAKDNGKRCSRGIRRRRNAPPPPAVTLPLLPETPDPKKTTPEAKSKTVPLWLSFENRGGAVSEKVDRGWYPPAAGSVVTVECVMDTWQQEEEEGLGLGSGDEERKVKLGEDTCPGFISDGYGRVTWTNGAYREAVGEGGVWLAMKVTVPYPYRGFTCRVRVQYACGKERTVPCDVWRMDSGGFAWRLDVKAALSLSLAL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2347 585 MobiDBLite consensus disorder prediction 386 401 - -
Ssu1g2347 585 PANTHER VON WILLEBRAND FACTOR A DOMAIN PROTEIN 324 582 - -
Ssu1g2347 585 MobiDBLite consensus disorder prediction 374 431 - -
Ssu1g2347 585 PANTHER VON WILLEBRAND FACTOR A DOMAIN PROTEIN 324 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2347 Ssu-Chr1 65794674 65808870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2347 - - gmx:102660960 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2347 1 65794674 65808870 Ssu6g1479 6 24297403 24298266 ECH
Ssu1g2347 1 65794674 65808870 Ssu1g2347 1 65794674 65808870 ECH
Ssu6g1479 6 24297403 24298266 Ssu1g2347 1 65794674 65808870 PCT