Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g2343 | ATGGCATTCCGTGTTCCTACTGTGGATGTCTCTGTTGTTGACCTCACAGTGAGGCTGGAGAAGCCAGCCACATATGAACAAATCAAAAGTGCTATCAAGGAGGAATCAGAGGGCAAGTTGAAGGGAATTCTTGGTTACACTGAAGATGATGTGGTCTCCACTGACTTTGTGGGTGATAGCAgGTCAAGTATTTTTGATGCGAAGGCAGGAGTTgctttgaatgaaaaatttgtGAAGCTGATCGCATGGTATGACAACGAGTGGGGTTACAGCAATCGCATTGTTGACCTGATTGTTCACATCGCCAAGAAGTCTCATTAA | 321 | 0.4268 | MAFRVPTVDVSVVDLTVRLEKPATYEQIKSAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGVALNEKFVKLIAWYDNEWGYSNRIVDLIVHIAKKSH | 106 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g2343 | 106 | Gene3D | - | 87 | 100 | - | - | |
| Ssu1g2343 | 106 | PANTHER | GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC1, CYTOSOLIC-RELATED | 1 | 104 | - | - | |
| Ssu1g2343 | 106 | SUPERFAMILY | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 1 | 84 | - | - | |
| Ssu1g2343 | 106 | Gene3D | Dihydrodipicolinate Reductase; domain 2 | 1 | 86 | - | - | |
| Ssu1g2343 | 106 | Pfam | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain | 1 | 84 | IPR020829 | GO:0016620 | |
| Ssu1g2343 | 106 | PANTHER | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE | 1 | 104 | IPR020831 | GO:0016620 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu1g2343 | Ssu-Chr1 | 65728208 | 65729102 | Proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu1g2343 | K00134 | - | ccaj:109796035 | 192.586 |