Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2337 ATGAACACTAGCATTAACAAGCTCGGTGACAGCGAAGGACGTAGAAACAAGTTAGTCTATGCTCgtcaaagaaagaaaaccaaGCTTTTAAAAGATGTGATAGAAAGGAGTTTTTCACCATTTCCATTTGATTGGAGCAATGTTCCCCAGGGATTGCGAacaaagaggaagagaaaattcAATGGCAAGGAAGTGCTTCCTAGACCCAAGGAAGCGCTTTCTAGACCCAAGGAAAAGCTAGACAGTGGAGTTTTTGATATTTACTTGAAGAAAATATGGAAGAGTTTCTCAGAAGATAGGAAGAGGCCCTTTGCGTACTTTGACAGCTTGTGGTTTAGCCTTTACAGGATTGCTTCATCTAAAGACAAGGTGCTGACTTGGattaaaaaagaacatattttctCAAAGGCGTATGTTTTTGTTCCTATAGTCTGCTGGGGTCACTGGAGCCTTTTGATCCTCTGCCATTTTGGTGAGAGCTTGCAATCAACTACCAGATCACGGTGCATGTTGTTGCTGGATTCTCTTGAAATGGCCAATCCTAAGCGGCTTGAACCTGAGGTTAGAAGATTTGTActagatatttataaaacagGGGACAGGCCTGAGACTAAGCATCTCGTATCTCAAATTCCATTTTTGGTGCCCAAGGTGCCACAACAAAGAGATGGTAATGAGTGTGGATTTTTCGTCCtctatttcattaatttgtttttggagCATGCGCCTGAGAATTTTAGCATGGAGGGGTACCCTTACTTTATGAAAGAAGATTGGTTTACCCCCGAAGGCTTGGATAGGTTTTATGAGAGACTTGATTCACTGAATTAG 831 0.3803 MNTSINKLGDSEGRRNKLVYARQRKKTKLLKDVIERSFSPFPFDWSNVPQGLRTKRKRKFNGKEVLPRPKEALSRPKEKLDSGVFDIYLKKIWKSFSEDRKRPFAYFDSLWFSLYRIASSKDKVLTWIKKEHIFSKAYVFVPIVCWGHWSLLILCHFGESLQSTTRSRCMLLLDSLEMANPKRLEPEVRRFVLDIYKTGDRPETKHLVSQIPFLVPKVPQQRDGNECGFFVLYFINLFLEHAPENFSMEGYPYFMKEDWFTPEGLDRFYERLDSLN 276
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2337 276 Gene3D - 104 215 - -
Ssu1g2337 276 ProSiteProfiles Ubiquitin-like protease family profile. 63 238 IPR003653 GO:0006508|GO:0008234
Ssu1g2337 276 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 31 275 - -
Ssu1g2337 276 Pfam Ulp1 protease family, C-terminal catalytic domain 122 258 IPR003653 GO:0006508|GO:0008234
Ssu1g2337 276 PANTHER CYSTEINE PROTEINASES SUPERFAMILY PROTEIN 31 275 - -
Ssu1g2337 276 Gene3D - 75 267 - -
Ssu1g2337 276 SUPERFAMILY Cysteine proteinases 75 254 IPR038765 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g2337 Ssu-Chr1 65592984 65594950 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2337 - - gmx:100780621 419.083