Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2336 ATGGAGGAGGGTttagagaagagagaattggAAGGTGAGGTAGTTAGCAAGGTTGCCGAAGTGATTTTGGCTTTAAAGAATGCGAAGCACGTCGATCAAGTCATTTGCGCGCTTCATTCTATAGCCACCCTTCTCTTCCCCCTTGACTCTTCTCTCCTCTCAGATAGCATCCACGAGAGTTATCAAGACCAGGTCTTCAGTGTCGAAGTTCCTTCTGCAGAAAAACGACATGGTTGGTGGCATGCGTTTTATCGAGGAGCTGCTTTTCCTACATTGGCTAGGTTTCTATTACTTGATGTTGCCTCGAACTGGTTGGGTTGTTTTCCCTTTTCGGCACAGAAATATGTTTATGATGTTTTCTTTGTTCGTGGATTGGTCACTGAGGTGCTGCAGATTTTGGTTCCTTTTCTCCAGCTGAATGTGAGTGATGGTCTTGATGTTAATGCTGTCCTCTCTAATTCTGAAAGATTGCTTGTACTGTGCTTGCTTGAAAATAATGGGGTGCTCCAGTTAGCAAAAGAGTTTGGTGGTCCTTCTAAATTGAAAAGCGTTACAGATGAATGGATCAAGATGGATATATCTAGGGTGGCACAGATTGTTGTATCTATTCCTGACAAAGCAAGAATGAACTCCTTGGCTTCATTGTCATCACATGTGTTCTTCAAACAGATTATTGTCCAACTACTCTCCTTGGCAGAAGAAAGAGAGATGATTTTGCTAGACGATGTAGACATGGATGAAATGGACAAAAATGGTGCACTGTTATTTGTAGGGGAAATGTTTTCTCGCATCTGTCGCCGTGGCTCTGCtgATCTTCTATCTAGTGAATTAATACCGGAAGTTCTAAGGCTTGTCAACAGCTGCTTATCATCCAGTAATGATTCAGTTTCTAAGGAATTGCTTCGTTCAAAACCAGACACGGTATTTTGGTTGAGAATAATGGAATCCATTAGTGATCCTTATACCACAGAAAGAATATCTGAGTTGATTTTGCATAAGTTAGCTACTCAACATGCAAATGATGTTCAAGCATATTGGGTGCTGTGGTTGTTATTCCATCGAATTTTTAAGCTTCAGGCTTCTGTCAGGTCTATGTTTGTTGACAAACTCCTGCTATGGAAAGTATTCCCTGTTAGCTGCCTGAAATGGATCCTTCAATTTGCTGTTCATGAATGCCCACCTGGTACCTCATTATCAGGACATAATCGCCCTGGGCTTTTGAATACTGTCCAACGTCTGGTCACAGTATGGTGTAAGAAAGAATTTGTGCAAACCGCACCTATCGAGCAACAAGCTTACATATCTGCTGCACTAGGCCTTTCTCTGGAGACAATGTCTAAGGAGGAATTGGATGGGATGAAGAATGCCATGCACTTGATTCTTCAAGGAGTTAgctGTAGGCTGGAGAGTCCTAATCATTTAGTTCGAAAAATGGCTAGCTGTGTTGCTTTGGCATTGTCTAAAATTATTGATCCAAAGAATCCTCTGTACCTTGATCATAGCTGCAGCGAGGAGACAATTGACTGGGAATTTGGATTCACTATCCCCAAGAAAGGGAATCTGGCTGCCTCAAATAGTGGAGAAAAAGGTGTTGACGGAACAAAAATATCCAGAGTGTCAGGTCCAGAGAGGGACTCTGATTCCCCCTCcaataaagagaaaagtatTCATGTAAAGGGTAAAAAGAAGTTGTTGGACTTTAATGTGCTTGATCCAGATGAGATTATTGATCCAGCATCACTGAATCTTGAATCAGACGATAATGATGAGGATGATGACGATAGTGCAAGCGAGAATTCATATTCCTCAAGTGATTCATCTTTACAGCCGTATGATTTGTCAGATGATGACTcagatttgaaaagaaaattttcacagCTGGCTGATGTAGTTGCAGCTCTTAGAAAATCCGATGATGCTGATGGGGTGGAAAGGGCTATTGATGTTGCTGAAAAGCTCATAAGAGCATCCCCAGATGAACTAAAACACGCAGCAAGGGATCTGACCAGAACTCTTGTTCAGGTTCGTTGCTCTGATATAGCTTTAGAAGGTGCAGAAGAATCAATTGAAGACAAAAGACAAAGAGCATTAGTTGCCTTAGCAGTCACTTGCCCATTTGAATCACTTGAGACGCTAAACAAGCTTTTGTATTCCCCTAATGTAGATATAAGTCAGCGCATTATGATACTAGATGTCATGACAGAAGCAGCTCAGGAGCTTGCTGAATCAAAAAGTATGAAACCCAAACATCAGATTAGTTCCCTTATTTCAGTTGTTTCAGATACCCGACCTTGGTTCCTACCTAGCAGCACAGGGACTCCTGGAGCTGGTTCCTGGAAAGAGATCTCTGGCACTGGTACTTTGTTGAGTTGGTCAAATAGCTATGGGAGGGAACTTCCCTCAAAACCTAATCAGGTCAAGAAAGGGAAAACACGCCGGTGGAGCCTACGATCTCCTGCACAACAAAACCAGATGGAGTATTCTCATAATAAGTTTCCCATGTATGCTGCTGCATTCATGCTTCCTGCCATGGAgggatatgataaaaaaaggcATGGTGTTGACTTGCTTGGCAGGGATTTTATTGTCTTTGGGAAACTCATTTACATGCTTGGGGTTTGTATGAAATGTGTAGCCATGCATCCAGAAGCTACTGTACTGGCTCCTTCCCTCCTGAATATGTTAAGATCCAGAGAGGTATGCCATCACCAGGAAGCATATGTGAGAAGAGCCGTCCTTTTTGCAGCTGCATGTTTATTGGTTGCCCTTCATCCTACTTACATTTCATCTGCCTTGCTTGAAGGAAATGTTGAAATTTCGACTGGCCTTGAATGGATTCGCACATTGGCCCTTGATGTAGCTGAGTCAGACACAGATAAAGAATGCTATACGATGGCTATGACATGTATACAACTCCATGCCGAGATGGCTCTTCAAACTTCCCGAGCATTGGAGTCAGCAAGAAGTTCACTCAAGGCAGGTCCCGGTCTTCCTTCTGATGCATCCAAATTGACCATTAAAATTCCCTACATAAACGGGGATTAG 3045 0.4158 MEEGLEKRELEGEVVSKVAEVILALKNAKHVDQVICALHSIATLLFPLDSSLLSDSIHESYQDQVFSVEVPSAEKRHGWWHAFYRGAAFPTLARFLLLDVASNWLGCFPFSAQKYVYDVFFVRGLVTEVLQILVPFLQLNVSDGLDVNAVLSNSERLLVLCLLENNGVLQLAKEFGGPSKLKSVTDEWIKMDISRVAQIVVSIPDKARMNSLASLSSHVFFKQIIVQLLSLAEEREMILLDDVDMDEMDKNGALLFVGEMFSRICRRGSADLLSSELIPEVLRLVNSCLSSSNDSVSKELLRSKPDTVFWLRIMESISDPYTTERISELILHKLATQHANDVQAYWVLWLLFHRIFKLQASVRSMFVDKLLLWKVFPVSCLKWILQFAVHECPPGTSLSGHNRPGLLNTVQRLVTVWCKKEFVQTAPIEQQAYISAALGLSLETMSKEELDGMKNAMHLILQGVSCRLESPNHLVRKMASCVALALSKIIDPKNPLYLDHSCSEETIDWEFGFTIPKKGNLAASNSGEKGVDGTKISRVSGPERDSDSPSNKEKSIHVKGKKKLLDFNVLDPDEIIDPASLNLESDDNDEDDDDSASENSYSSSDSSLQPYDLSDDDSDLKRKFSQLADVVAALRKSDDADGVERAIDVAEKLIRASPDELKHAARDLTRTLVQVRCSDIALEGAEESIEDKRQRALVALAVTCPFESLETLNKLLYSPNVDISQRIMILDVMTEAAQELAESKSMKPKHQISSLISVVSDTRPWFLPSSTGTPGAGSWKEISGTGTLLSWSNSYGRELPSKPNQVKKGKTRRWSLRSPAQQNQMEYSHNKFPMYAAAFMLPAMEGYDKKRHGVDLLGRDFIVFGKLIYMLGVCMKCVAMHPEATVLAPSLLNMLRSREVCHHQEAYVRRAVLFAAACLLVALHPTYISSALLEGNVEISTGLEWIRTLALDVAESDTDKECYTMAMTCIQLHAEMALQTSRALESARSSLKAGPGLPSDASKLTIKIPYINGD 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2336 1014 Pfam Telomere length regulation protein 626 737 IPR019337 -
Ssu1g2336 1014 MobiDBLite consensus disorder prediction 583 598 - -
Ssu1g2336 1014 Gene3D - 619 759 IPR038528 -
Ssu1g2336 1014 PANTHER TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER 8 984 - -
Ssu1g2336 1014 MobiDBLite consensus disorder prediction 522 557 - -
Ssu1g2336 1014 MobiDBLite consensus disorder prediction 538 557 - -
Ssu1g2336 1014 MobiDBLite consensus disorder prediction 578 615 - -
Ssu1g2336 1014 MobiDBLite consensus disorder prediction 800 820 - -
Ssu1g2336 1014 MobiDBLite consensus disorder prediction 599 613 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2336 K11137 - gmx:100779550 1692.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2336 1 65573981 65588059 Ssu1g2336 1 65573981 65588059 ECH