Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2333 ATGGGGAAGAAGACGAAGAAGCCCGGCAAAGGCAAAGAGAAAACCGAGAGAAAAACCGCAAAAGCCGAGGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTTTCTCCCGAGGACGACATCGATGCCATTTTGTTGAGCATTCAAAAAGAGGAAGCCAAAAAGAAGGAAGTCCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCGCTCGCCGTCAATCCCTTGAAAGAGACCGAGCTGATTCTCTATGGTGGCGAATTCTACAACGGAAACAAGACCTTCGTGTACGGCGATCTCTACCGGTATGACGTGGAGAAGCTGGAATGGAAATTGGTTTCGAGTCCTAACAGTCCTCCTCCTCGCAGTGCTCATCAAGCGGTTGCGTGgaagaattatatttatatttttgGTGGTGAGTTTACATCTCCAAACCAAGAGAGGTTTCATCACTACAAGgATTTTTGGATGTTGGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTGAAAGGCTGCCCGAGTCCACGGTCAGGACATCGAATGGTATTGTACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGGACGTAGtggttttcaattatttgtttacCAAGATGATATTTTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAACTCCTCTGAGAAAGGAATTGTTCATTCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGACCTCGTGCTGGGTTTTCCATGTCTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGCGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTCGAATGAGCTTTATGGCTTTCAGTTAGACAACAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACAAAAGATAAGTTCAAAAGAATTGAACAAAATTGTACTGATGATGTCAACAAGAAGATAAATCCAGCATGTACAGCAAGAGAAGATACTGAGTCAGAGGATGAAGAAAGCAACATTGATGAAATATCCAAGAATATAGCGTCAAACATGTCTATTGTTGATGGTGAATCACTTACCAAATCTGAAGGAAAGCCCAAGGAATCTAGTGCTAAAGTGGACATTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCCTGTGGACGTATTAATGCTTGTATGGCCGTTGGAAGagatacattatatatatatggtggcaTGATGGAGATTAAAGATCAAGAAATCACTCTTGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACcgGCATCAGAATCTGAATGGGTGGAAGCTTCagatgatgatgaagaaaatgaagatgatgatgaagatgaatCCAATGGTGATAGTTCAACTGATGAGGATGAAGATGatgaggaagaggaggaggaagagGCTCAGAATGCGTCAGTTCAGGTGGGAGATGCTGTTGCTCTAATCAAAGGAGGGGGAAAGAATCTGCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCTAGTCTTGGCTTGTCAGATTCACAGAGAACACCATTGCCAGGAGAATCCTTGAGGGACTTCTACAGACGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTTCGCAAGGATGGTTTTGATCTTGCTGAAGCTCGGTACAGGGAGCTGAAACCAATTCTTGACGAGCTGGCTCTATTGGAAGCTGAGCAGAAAGCTGAGGAGGACGAAGGACCAGAAACTAGTGCAAAGAAAAGAGGCAAGAAGAAAACtagaaattga 1983 0.4075 MGKKTKKPGKGKEKTERKTAKAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLAVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTGRSGFQLFVYQDDIFLYGGYSKEVSSDKNSSEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMSVHKRRALLFGGVVDIEVEGDVMMSLFSNELYGFQLDNNRWYPLELRKEKSTKDKFKRIEQNCTDDVNKKINPACTAREDTESEDEESNIDEISKNIASNMSIVDGESLTKSEGKPKESSAKVDIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASDDDEENEDDDEDESNGDSSTDEDEDDEEEEEEEAQNASVQVGDAVALIKGGGKNLRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEDEGPETSAKKRGKKKTRN 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2333 660 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 653 - -
Ssu1g2333 660 MobiDBLite consensus disorder prediction 1 35 - -
Ssu1g2333 660 SUPERFAMILY Kelch motif 82 484 IPR015915 GO:0005515
Ssu1g2333 660 MobiDBLite consensus disorder prediction 493 533 - -
Ssu1g2333 660 Pfam Domain of unknown function (DUF4110) 569 654 IPR025183 -
Ssu1g2333 660 Pfam Kelch motif 237 290 IPR011498 GO:0005515
Ssu1g2333 660 Coils Coil 12 32 - -
Ssu1g2333 660 MobiDBLite consensus disorder prediction 638 660 - -
Ssu1g2333 660 Pfam Galactose oxidase, central domain 445 487 - -
Ssu1g2333 660 Pfam Galactose oxidase, central domain 68 122 - -
Ssu1g2333 660 Gene3D - 42 372 IPR015915 GO:0005515
Ssu1g2333 660 MobiDBLite consensus disorder prediction 12 35 - -
Ssu1g2333 660 MobiDBLite consensus disorder prediction 490 540 - -
Ssu1g2333 660 Pfam Galactose oxidase, central domain 135 187 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2333 91 314 Acyl Lipid Metabolism Gene Families AT3G05420 28.151 3.19e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2333 - - gmx:100818228 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2333 1 65536544 65547391 Ssu1g2333 1 65536544 65547391 ECH