Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2332 ATGGGAAGAGATATATGTGGAAGTGGAAAAATGGGTGGTGGGTGTGTTTCATGGTTGAGAAACTCATGGTCCCAAATGGAGAAAGCCTTAAACGATGCCGTTTCCAAGAGCTTCGCTGGGAGGTACTTCAAGTTAGAAGCAAGGAAAAGCTGTTTCACAAGGGAACTTCGTGCTGCCACGGCCACGTTTCTCACCATGGCATACATCATCACCGTCAACGCCACCATCATCGCCGTCTCCGGCGGGACCTGCTCCGCCGCCGACTGCTCCTCTCCGGCGGGCCCGGACTGCATGCTGAAGCCCAACGTTGGGTATGAGAGTTGTCTCGCAAAGACCAAGAGTGACTTGGTTGTGGCCACTGCTGTTTCAGCCTTGGTTGGGTCTGTTGCCATGGGCCTGTTGGCCAACCTCCCTTTGGGCCTGGCTCCAGGTATGGGGCCcaatgcttatttagcttttaatttGGTTGGTTATCATGGAAATGGGTCACTCTCGTACCAAACTGCACTGGCCGTGATTTGTGTTGAGGGGTGTGCTTTTCTTTTAGTCTCTGCTGTTGGGTTGAGGGGGAAGCTTGCCAAGCTCATTCCTCATTCAGTTAGGCTTGGTTGTGCTGCTGGGATTGGGCTTTTCATTGCCTTTACGGGCTTGCAGGCCAACCTGGGTGTTGGGCTTATTGGGCCTGATGCTTCCAATCTGATTACCATCACAGCCTGTAAATATGTAAACCCAGAAACTGGGGCATGCTTGGGTGGGAAAATGCAAAGCCCAAAGTTCTGGCTGGGCCTAGTTGGTTTCCTCATCACAAGTTATGCGTTGATGAAGAATATCAAGGGGAGCATGATTTATGGCATTCTTTTTGTGACTCTGGTGTCTTGGTTTAGGCACACTGAGGTGACTTATTTTCCTGACACCCCACTTGGTGAtgcaaattataactatttcaAGCAAGTGGTTGGTTTTCACAAGATTGAGTCCACTGCTGGGGTTCTCAGGTTCAGTGAGTTTAATAGAAGGGAAGTTTGGGTGGCTTTGGCTACTTTGTTCTATGTTGATGTGCTTGCCATCACTGGCACTACGTATACCATGGCAGAGATTGGTGGGTTTGTGGATGAGAAAGGACATTTTGAAGGTGAATATGTGGCTTACATGGTTGATGCAGGGAGCACCATTGTGGGTTCTGCATTGGGTGTGACAACCACAGCAACGTTTGTAGAGTCATCAGCTGGTTTGAGGGAAGGGGGTCGCACGGGATTAACAGCAGTTTTCATTGGGTTGTTCTTctttttgtcattgtttttcaCTCCTCTATTGTCTAGCGTTCCTCCATGCGCCATAGGACCCTCACTGGTGATGGTTggggtgatgatgatgaaggtGGTGAGGGACATAGATTGGACCAACATAAAGGATGCAGTGCCTGCTTTTGCTACAATGCTCCTCATGCCTCTCACTTATTCCATAGCAAATGGGATTATTGGTGGGATTGGACTCTACATTGCTCTTAGCCTCTATGACTATGCTGCAAGCACCATAAATTGGTTGAGGAAGATGAGAAGAATGGTGGTCAAGGAACAAAACCAAGTTTCTGCTACTGCAGGTGTTGAGTCAACAGTGGAAATTATATGA 1629 0.4678 MGRDICGSGKMGGGCVSWLRNSWSQMEKALNDAVSKSFAGRYFKLEARKSCFTRELRAATATFLTMAYIITVNATIIAVSGGTCSAADCSSPAGPDCMLKPNVGYESCLAKTKSDLVVATAVSALVGSVAMGLLANLPLGLAPGMGPNAYLAFNLVGYHGNGSLSYQTALAVICVEGCAFLLVSAVGLRGKLAKLIPHSVRLGCAAGIGLFIAFTGLQANLGVGLIGPDASNLITITACKYVNPETGACLGGKMQSPKFWLGLVGFLITSYALMKNIKGSMIYGILFVTLVSWFRHTEVTYFPDTPLGDANYNYFKQVVGFHKIESTAGVLRFSEFNRREVWVALATLFYVDVLAITGTTYTMAEIGGFVDEKGHFEGEYVAYMVDAGSTIVGSALGVTTTATFVESSAGLREGGRTGLTAVFIGLFFFLSLFFTPLLSSVPPCAIGPSLVMVGVMMMKVVRDIDWTNIKDAVPAFATMLLMPLTYSIANGIIGGIGLYIALSLYDYAASTINWLRKMRRMVVKEQNQVSATAGVESTVEII 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2332 542 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 17 542 IPR045018 GO:0015205
Ssu1g2332 542 PANTHER ADENINE/GUANINE PERMEASE AZG2 17 542 IPR029950 GO:0005345|GO:0006863
Ssu1g2332 542 Pfam Permease family 111 491 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2332 Ssu-Chr1 65529612 65531240 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2332 K06901 - gmx:100778491 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2332 1 65529612 65531240 Ssu1g2332 1 65529612 65531240 ECH