Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2330 ATGGTTAGGGCTCGCGAGAACTGGGAGAAGCTGGTTCGCGCGACGCTGAAGAGGGAGCAACTGAGGAATGTAGGCCAAGGCCACGCCAGAGTCCCTAGCGGAATCGCCGGCGCGGTTCCGCCGTCGCTCGCTCAAACCACCAACATTGATTTGATCTTGCAGGCCGCCGATGAGATTCAATCGGAGGACTCTAACGTCGCTAGGATCTTGTGCGAGCAGGCATATAGTATGGCTCAAAATCTTGATCCCAACAGTGATGGTAGGGGAGTTCTACAGTTCAAGACTGGTTTAATGTCTGTAATCAAGCAAAAACTTGCTAAGAAGGATGGGGTACGGATTGATCGCAATCGCGACATTGAAAACCTGTGGAAGTTTTATCAAAACTACAAGCAACGTTATAGAGTGGATGACATCCAACGAGAAGAACAGAGATTGCAAGAATCTGGAACTTTTAGCTCCACCACACTGGGAGAGTTGAAACTTAGATCGTCAGAAATGAGAAAGATAATAGCCACACTACGTGCTTTAGTGGAGGTCCTGGAGGCACTTAGCAAGGATGCGGATCCCAGTGGAGTTGGAGGACTCATAATGGAGGAGttgagaaaaataaaaaagtcaagtGTGACGTTATCTGGAGAGCTGACACCATACAATATTATTCCTCTGGAAGCACCGTCACTAACGAATCCTATCCGAATTTTCCCAGAAGTTAAAGCGGCAGTATCTGCAATTAGATATACTGATCAGTTCCCGAGACTTCCTGCTGGATTTAAAGTATCCGGACAAAGGGATGCAGACATGTTTGATCTTTTGGAATTTGTTTTCGGTTTCCAGAAAGATAATGTAAGGAACCAGCGTGAAAATGTTGTTTTGATGATAGCAAATAAGCAGTCTCGACTTGCCATACCTGCTGAAACTGATCCAaaaatagatgagaaaacaATCAATGAAGTGTTCATGAAGGTGCTAGATAACTATATCAGGTGGTGCAGATACTTGCGAATTCGTCTTGCATGGAATAGTTTAGAGGCAATTAACCGGGATAGGAAGCTTTTTTTGGTTTCCctgtattttcttatttgggGTGAAGCTGCAAATGTCCGTTTTCTTCCTGAGTGCATTTGCTATATATTCCACCATATGGCTAAAGAGTTGGACGCTATTTTGGATCATGGAGAAGCTGGACCTGCAGCCAGCTGTGTAACTGATGATGGTTCTGCAAAATTCcttgagaaaataatttgtcCTATCTATGAAACGCTAGCTGCAGAAGCTGGTAGAAACAACAATGGGAAAGCTGCACATTCAGCGTGGAGGAATTATGATGACttcaacgaatacttttgGTCTCCTGCTTGTTTTGAATTAAACTGGCCAATGAGGATCAATTCTCCATTCTTGCTGAAACCTAAAAGGTCAAAAAGGACTGGTAAAAGCAGTTTTGTTGAGCATAGAACATTTCTTCACTTGTATCGAAGTTTCCATCGTCTTTGGATCTTCTTGGCATTAATGTTTCAGGCTTTGACAATCATTGCTTTCAATCAGGGACATATTAACTTGGATACTTTCAAAACAGTACTTAGCATTGGGCCGTCATTTGTAATCATGAATTTCGTCAAGAgTTGCTTAGATGTGTTGCTTACTTTTGGGGCATACACCACTGCAAGAGGCATGGCTGTTTCGAGACTAGTTATAAGGTTTTTTTGGGGTGGCTTGACTTCTGCGTTTGTAACATATGTTTACCTGAAGGTTTTGCAGGAGAGAAATAGTCATAACTCTGACAATTCATTCTATTTTCGGATATACCTTCTTGTGCTTGGTGTTTATGCTGCTCTACGTCTATTCCTTGCACTGTTGCTCAAATTTCCAGCTTGTCATGCACTTTCGGAAATGTCTGATCAATCATTCTTTCAGTTTTTTAAGTGGATTTATCAAGAACGGTACTATGTTGGACGTGGTCTTTATGAGAGGATGAGTGATTACTGCAGGTATGTGGCCTTTTGGTTGGTGGTACTTGCCTGCAAATTCACTTTTGCTTACTTTCTCCAGATTAGACCTCTTGTCGAACCTACAAATATCATTGTTGATCTTCCATCTTTGACTTACTCATGGCATGATTTGATCTCAAAGAAGAATAACAATGTCTTGACTGTTGTTAGCTTGTGGGCTCCTGTTGTGGCTATTTATGTCATGGATATTCTCATTTGGTACACTATAATGTCAGCAATTGTTGGTGGTGTGATTGGTGCTCGGGCTCGGCTAGGCGAGATTCGTTCAATCGAAATGGTGCATAAACGTTTTGAAAGTTTCCCAGGGGCATTTGTAAAAAATTTGGTCTCTCCACAAATAAAAAGGATTTCCTTCAGTGGACAATCAACccagGATTCTCAAGATATGAACAAAGCATATGCTGCCATGTTTGCTCCATTTTGGAATGAGATAATTAAAAGCCTGCGTGAGGAAGATTTTATTAGCAATAGgGAAATGGACCTGCTTTCTATTCCTAGTAATGCAGGAAGTCTGAGATTAGTTCAATGGCCTTTGTTTCTTCTAAGCAGTAAGATCCTGTTGGCGATTGATTTGGCTTTGGACTGCAAAGATACTCAGACAGATCTGTGGAACAGGATATGTAGGGATGAATATATGGCCTATGCAGTTAAGGAATGCTACTACAgtgttgaaaaaatattatattcgtTAGTTGATAACGAAGCAAGACTTTGGGTTGAAAGAATTTTTCGTGAGATCAATAACAGTATTGGAGAGGGTTCGCTTGTTATAACCTTGTCTCTTAAGAAGCTTCCAGTTGTTTTATCAAGACTTACAGCATTGACTGGACTCCTGatTCGAAATGATCCTGAGCTTGCTAAAGGTGCTGCAAAAGCTGTACATGACCTGTATGAAGTTGTTACTCATGAACTGGTATCTTCAGATTTAAGGGAGAATCTTGATACATGGAACATTTTAGCTAGAGCTAGGGATGAAGGACGCCTTTTTTCTAGGATAGTATGGCCTAGTGATCCTGAAATTAAAGAGCTTGTGAAGCGGTTGCATCTTCTTCTTACTGTAAAGGATTCTGCTGCTAATGTTCCAAAAAATCTTGAAGCCAGGAGAAGATTAGAGTTTTTctcaaattcattatttatgGACATGCCTTCAGCAAAGCCTGTTAGTGAAATGTTGCCATTCAGTGTTTTCACCCCATACTATAGTGAAACTGTGCTTTATAGTACTTCCGAATTGcaaaaagagaatgaagatGGAATATCTACTCTTTTCTATCTTCAAAAGATATTTCCAGATGAATGGGAAAACTTGCTTGAAAGAATTGGTCGAGGAGCATCCACTGGGGATGCGGAACTTCAAGAAAGTTCCAGTGACTCTTTGGAACTTCGTTTTTGGGCATCTTATCGAGGACAGACTCTTGCTAGGACAGTGCGTGGTATGATGTACTATAGGAGGGCTTTAATGCTGCAGAGCTTTCTGGAGAGCAGATCACTGGGAGTGGACAATTTTTCTCAAAACTTCATTGCAAGTCAAGATTTTGAATCATCTCGTGAATCACGGGCACaagcagatttgaagtttactTATGTTGTATCATGCCAAATTTATGGTCAACAAAAGCAGCGGAAGACACCAGAAGCTGCTGATATTGCTTTATTGTTACAGAGAAATGAGGCACTCCGAGTTGCTTTCATTCATGTTGATGAAAGTACAACTGATGCAAACACTCCAAAGGTGTTTTATTCAAAGCTTGTCAAAGCCGATATAAATGGAAAAGATCAGgaaatatattctattaaacTTCCTGGAGATCCAAAGCTTGGGGAAGGAAAGCCTGAAAACCAAAACCATGCCATAATTTTCACTCGTGGGGATGCTGTTCAAACTATTGACATGAATCAGGACAATTATCTTGAGGAAgctataaaaatgagaaatctTCTGGAGGAATTCCATGCGAATCATGGCCTTCGACCTCCAAGCATTCTTGGAGTGAGGGAACATGTTTTTACAGGAAGTGTCTCATCCTTGGCTTGGTTCATGTCAAATCAAGAAACTAGCTTTGTAACCTTGGCCCAACGAGTTTTAGCAAATCCTCTCAAAGTTCGTATGCACTATGGACACCCAGACGTATTTGACAGAATATTTCACATAACTCGAGGAGGCATTAGTAAGGCATCCCgtgttattaatattagtgAAGATATATATGCTGGTTTCAACTCCACATTGCGGCTGGGAAATGTCACACACCATGAATATATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAGATTGCCCTCTTTGAGGGGAAAGTGGCAGGTGGTAATGGAGAGCAAGTGCTTAGCAGGGATATTTACAGGCTTGGACAACTTTTTGATTTCTTCAGAatgctttctttcttcttcacaaCTGTTGGTTATTATGTCTGCACCATGATGACAGTCCTTAcagtatatatattcttatatggAAGAGCATACCTGGCGTTTTCTGGTCTTGATGAATCTGTCTCAGAGGAGGCAAAATTGAAGGGTAACACAGCACTTGATGCAGCTTTGAATGCTCAATTTTTGGTCCAAATTGGCGTTTTTACTGCAATACCAATGATAATGGGTTTTATACTTGAATTAGGATTGCTGAAGGCTGTTTTCAGTTTCATCACGATGCAACTACAGTTGTGTTCTGTCTTCTTCACGTTCTCATTGGGAACTAGAACTCATTATTTTGGGCGCACCATTCTCCATGGGGGTGCAAAATACCGTGCAACTGGTAGAGGCTTTGTTGTCCGTCACATAAAGTTTGCTGAAAATTACAGACTATATTCTAGGAGCCACTTTGTCAAGGCGCTTGAAGTGGCACTACTACTTATAGTTTATATCGCATATGGGTATGCAGAGGGAGGTGCTGTCACGTATGTATTGCTAACTCTAAGCAGTTGGTTCCTTGTCATTTCTTGGCTTTTCGCACCTTACATTTTCAATCCCTCTGGTTTCGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACAAGTTGGCTTCTTTACAAAGGAGGAGTAGGGGTAAAGGGAGAAAATAGTTGGGAGTCTTGGTGGGATGAAGAACAGATGCATATCCAAACTTTGAGAGGTCGCATTTTAGAGACAATTTTGAGTGCAAGGTTCTTCTTGTTTCAATATGGTATTGTGTATAAGCTGCATCTTACTGGGAAAAATACATCACTTGCGatataTGGATTCTCGTGGGTTGTCTTGGTTGGAATTGTCTTGATATTTAAGATCTTTACCTACAGCCCAAAAAAGTCTGCTGATTTTCAGCTAGTGTTGCGATTTTCACAGGGACTTGCATCTATAGGCCTTGTTGCAGCTGTGTGTCTTGTTGTTGCCTTTACTCAACTGACAATAGCTGACCTTTTTGCAAGCATCCTTGCATTTATCCCTACTGGATGGGGAATATTATCCTTGGCAATTGCATGGAAGAAGATAGTTTGGAGTCTTGGCTTGTGGGATTCTGTCCGTGAGTTCGCTAGAATGTATGATGCTGGAATGGGTATGATCATTTTTGCACCAATAGCGTTTTTATCATGGTTTCCATTCATTTCCACTTTCCAGTCTCGCCTTCTCTTCAATCAAGCCTTCAGCCGTGGTCTTGAAATCTCTATCATCCTTGCTGGAAATAAAGCTAATGTTGAGGCTTAA 5715 0.3967 MVRARENWEKLVRATLKREQLRNVGQGHARVPSGIAGAVPPSLAQTTNIDLILQAADEIQSEDSNVARILCEQAYSMAQNLDPNSDGRGVLQFKTGLMSVIKQKLAKKDGVRIDRNRDIENLWKFYQNYKQRYRVDDIQREEQRLQESGTFSSTTLGELKLRSSEMRKIIATLRALVEVLEALSKDADPSGVGGLIMEELRKIKKSSVTLSGELTPYNIIPLEAPSLTNPIRIFPEVKAAVSAIRYTDQFPRLPAGFKVSGQRDADMFDLLEFVFGFQKDNVRNQRENVVLMIANKQSRLAIPAETDPKIDEKTINEVFMKVLDNYIRWCRYLRIRLAWNSLEAINRDRKLFLVSLYFLIWGEAANVRFLPECICYIFHHMAKELDAILDHGEAGPAASCVTDDGSAKFLEKIICPIYETLAAEAGRNNNGKAAHSAWRNYDDFNEYFWSPACFELNWPMRINSPFLLKPKRSKRTGKSSFVEHRTFLHLYRSFHRLWIFLALMFQALTIIAFNQGHINLDTFKTVLSIGPSFVIMNFVKSCLDVLLTFGAYTTARGMAVSRLVIRFFWGGLTSAFVTYVYLKVLQERNSHNSDNSFYFRIYLLVLGVYAALRLFLALLLKFPACHALSEMSDQSFFQFFKWIYQERYYVGRGLYERMSDYCRYVAFWLVVLACKFTFAYFLQIRPLVEPTNIIVDLPSLTYSWHDLISKKNNNVLTVVSLWAPVVAIYVMDILIWYTIMSAIVGGVIGARARLGEIRSIEMVHKRFESFPGAFVKNLVSPQIKRISFSGQSTQDSQDMNKAYAAMFAPFWNEIIKSLREEDFISNREMDLLSIPSNAGSLRLVQWPLFLLSSKILLAIDLALDCKDTQTDLWNRICRDEYMAYAVKECYYSVEKILYSLVDNEARLWVERIFREINNSIGEGSLVITLSLKKLPVVLSRLTALTGLLIRNDPELAKGAAKAVHDLYEVVTHELVSSDLRENLDTWNILARARDEGRLFSRIVWPSDPEIKELVKRLHLLLTVKDSAANVPKNLEARRRLEFFSNSLFMDMPSAKPVSEMLPFSVFTPYYSETVLYSTSELQKENEDGISTLFYLQKIFPDEWENLLERIGRGASTGDAELQESSSDSLELRFWASYRGQTLARTVRGMMYYRRALMLQSFLESRSLGVDNFSQNFIASQDFESSRESRAQADLKFTYVVSCQIYGQQKQRKTPEAADIALLLQRNEALRVAFIHVDESTTDANTPKVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYLEEAIKMRNLLEEFHANHGLRPPSILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFFFTTVGYYVCTMMTVLTVYIFLYGRAYLAFSGLDESVSEEAKLKGNTALDAALNAQFLVQIGVFTAIPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGENSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGIVYKLHLTGKNTSLAIYGFSWVVLVGIVLIFKIFTYSPKKSADFQLVLRFSQGLASIGLVAAVCLVVAFTQLTIADLFASILAFIPTGWGILSLAIAWKKIVWSLGLWDSVREFARMYDAGMGMIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNKANVEA 1904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2330 1904 Pfam 1,3-beta-glucan synthase component 1030 1802 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Ssu1g2330 1904 PANTHER BNAC03G35120D PROTEIN 1 1902 - -
Ssu1g2330 1904 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1902 - -
Ssu1g2330 1904 SMART FKS1_dom1_2 348 461 IPR026899 -
Ssu1g2330 1904 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 350 458 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2330 Ssu-Chr1 65443829 65510478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2330 1 1904 Glycosyltransferase AT2G36850 77.853 0.0 3125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2330 K11000 - gmx:100777959 3602.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2330 1 65443829 65510478 Ssu1g2330 1 65443829 65510478 ECH