Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2326 ATGAAACGGTTTTTCAAAGTAGTGGAGAAAGATTCAGATGGGTCTGTGAAGAAGCCAAGAGAGAATGACGCTGAGGCCGAGGCTGAGGCTGCAGAGAATAAGAAGAAGGAGCCGTTGAAGTTCATGACTTGGAATGCCAACAGCTTTCTCCTTCGAGTCAAAAACAATTGGCCCGACTTCACCAACCTCATCACCACTTTTGATCCTGATGTCATTGCCATACAGGAAGTGCGGATGCCTGCTGCTGGAGCCAAGAGTGCATCTAAAAATCAGGGAGAAATAAAAGATGATACAAGCTCTGCCAGGGAAGAAAAGAAGATATTGATGCGTGCACTTTCTGCTCCACCTTTTGGGAACTATCATGTTTGGTGGTCTCTCGCAGATTCAAAGTATGCAGGGACAGCACTACTGGTGAAAAAATGCTTCAAGCCTAAAAGTGttgtttttaatcttgataAAATAGcTTCAAAGCATGAACCAGATGGTCGAGTAATCCTAGCTGAATTTGAAACACTTCGTTTATTGAATACATATGTACCAAACAATGGATGGAAAGAGGAGGCAAACTCatttcaaaggagaagaaaatggGACAAAAGGATTCTGGAATTTGTTACGCAAAATTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTGAGTCATCCAGAGTTTTTCAGTGCAGCAAAGCTCAACGGTTATATTCCTCCAAATAAAGAGGATTGTGGGCAGCCTGGGTTTACCTTGGCTGAAAGAAAACGGTTTGGTACCATCTTAAGAGAGGGAAAGCTGTTGGATGCCTACAGATTTCTGCACAAGGATAAGGACATGGAGCGAGGTTTCTCATGGTCAGGAAACCCAGTTggaaaGTATCGTGGAAAACGGATGAGAATAGACTACTTTTTAGTTTCAGAGAAACTTAAAGAAAGGATTGTTGCATGTGAAATGCATGGACACGGGATAGAGTTAGAAGGTTTCTATGGAAGTGATCATTGTCCGGTTACATTGGAGCTCTCTCccagttctaactctcaaaacgAGGATCCAGTATAA 1077 0.4048 MKRFFKVVEKDSDGSVKKPRENDAEAEAEAAENKKKEPLKFMTWNANSFLLRVKNNWPDFTNLITTFDPDVIAIQEVRMPAAGAKSASKNQGEIKDDTSSAREEKKILMRALSAPPFGNYHVWWSLADSKYAGTALLVKKCFKPKSVVFNLDKIASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKLNGYIPPNKEDCGQPGFTLAERKRFGTILREGKLLDAYRFLHKDKDMERGFSWSGNPVGKYRGKRMRIDYFLVSEKLKERIVACEMHGHGIELEGFYGSDHCPVTLELSPSSNSQNEDPV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2326 358 Gene3D Endonuclease/exonuclease/phosphatase 5 348 IPR036691 -
Ssu1g2326 358 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 24 350 - -
Ssu1g2326 358 Pfam Endonuclease/Exonuclease/phosphatase family 42 339 IPR005135 GO:0003824
Ssu1g2326 358 MobiDBLite consensus disorder prediction 1 32 - -
Ssu1g2326 358 TIGRFAM xth: exodeoxyribonuclease III (xth) 39 346 IPR004808 GO:0004518|GO:0006281
Ssu1g2326 358 ProSiteProfiles AP endonucleases family 1 profile. 39 348 IPR004808 GO:0004518|GO:0006281
Ssu1g2326 358 PANTHER AP ENDONUCLEASE 24 350 IPR004808 GO:0004518|GO:0006281
Ssu1g2326 358 CDD Ape1-like_AP-endo 39 346 - -
Ssu1g2326 358 SUPERFAMILY DNase I-like 39 346 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2326 - - gmx:100817167 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2326 1 65360487 65367470 Ssu1g2326 1 65360487 65367470 ECH