Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2325 ATGGCAGCAAATAGCATCATCTCCATTTCCTCTCCTTCACTCTTGACTCCAACAACACCTCAAGCAAAAACCCAATGCCTCCTCAAACACAAGGACCATGATCAAGTTCCAACATCCTCCTTCACAACACTTGCTGCTCTTAAGATATCAAGACCAACAACTACGTTTGGAATCACTACAACTACAAGGGTTCCTCCTCGCAGGTTGAGTTGTTCAGCATCGGCGTCTTCCTCTTCCACTCTTCCCTCGGCTCTTCTATTTGACTGTGACGGAGTTCTTGTGGATACTGAGAAAGATGGCCACCGCATATCTTTCAACCAAACCTTCCAAGAGAAAGAACTAGGCGTTACCTGGGATGTAGACTTGTACGGGGAATTGCTCAAAATTGGAGGCGGAAAAGAAAGGATGACTGCGTACTTTAACAAGACAGGTTGGCCTGCAAATGCCCCGGCGGGTGAGCAAGAAAGGAAAGAATTTATAGCATCACTCCACAAACAAAAGACAGAACTATTTATGGCCCTTATTGAGAAAAAACTGCTGCCTCTTCGTCCAGGTGTTGCAAAGATTATCGATCAGGCTTTAGCTCAAGGAGTCCATGTTGCAGTTTGCAGCACTTCCAATGAGAAGGCGgTATCTGCAATAGTATCATTCTTGCTGGGACCTGAGCGAGCAGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGTAAAAAGCCTGATCCAGCCATCTATCTATTAGCAGCCAGCACTCTGGGTGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCCGCTAAAGCAGCTGGAATGACGTGTATAATAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTAAATGCAGATGCAGTCTTTGACTGCATTGGTGATCCTCCTGAGGAGAGATTTGATTTAGCATTCTGTGGAAGCCTTCTCGAGAAGCAATACGTGAGCTAG 978 0.4571 MAANSIISISSPSLLTPTTPQAKTQCLLKHKDHDQVPTSSFTTLAALKISRPTTTFGITTTTRVPPRRLSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPAGEQERKEFIASLHKQKTELFMALIEKKLLPLRPGVAKIIDQALAQGVHVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKAAGMTCIITKSGYTADEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKQYVS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2325 325 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 55 324 IPR044999 GO:0016787
Ssu1g2325 325 PANTHER CBBY-LIKE PROTEIN 55 324 - -
Ssu1g2325 325 CDD HAD_CbbY-like 87 284 - -
Ssu1g2325 325 Gene3D Putative phosphatase; domain 2 96 180 IPR023198 -
Ssu1g2325 325 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 80 308 - -
Ssu1g2325 325 SUPERFAMILY HAD-like 83 304 IPR036412 -
Ssu1g2325 325 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 164 281 IPR006439 -
Ssu1g2325 325 Pfam Haloacid dehalogenase-like hydrolase 85 280 IPR041492 -
Ssu1g2325 325 Gene3D - 84 301 IPR023214 -
Ssu1g2325 325 SFLD phosphoglycolate phosphatase 80 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2325 Ssu-Chr1 65349750 65354917 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2325 - - pvu:PHAVU_009G169900g 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2325 1 65349750 65354917 Ssu1g2325 1 65349750 65354917 ECH