Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2316 ATGGCTACGAGTGGAGGCGTTGAGGGGCAGAAGCAGAACAACCCTGCCCTTGACCCGGATTTGGATACTCCAGATAACCCGGATCACGAGTTCGCTGAGTTCGGAGCGGGTTGCTTCTGGGGTGTGGAGTTGGCCTTTCAGCGAGTTGTGGGAGTGGTGAAGACTGAGGTTGGATATTCTCAGGGTCACACCCCGGATCCGAACTACAAACTGGTATGCACCGGAACCACTAACCACGTTGAAGTGGTTCGGGTCCAGTTCGACCCGAAGGTTTGCCCCTACACAGATCTCCTTGCTCTCTTTTGGTCTCGACATGACCCCGCTTCTGTCAACCGCCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGAATATACTACTACAACGAAACCCAGGCTCGTTTAGCCGAGGAATCGAAGGAAGCAAAACAGTTGGAattgaaggagaagaagatTGTGACAGAAATACTTCCAGCTAAGAGGTTTTACAAAGCAGAGGAATACCATCAACAATATCTGGAGAAGGGTGGAGGTCAAGGCAACAAACAGTCTGCAGAAAAGGGCTGCACTGATCCCATCAGGTGCTATGGCTGA 594 0.5017 MATSGGVEGQKQNNPALDPDLDTPDNPDHEFAEFGAGCFWGVELAFQRVVGVVKTEVGYSQGHTPDPNYKLVCTGTTNHVEVVRVQFDPKVCPYTDLLALFWSRHDPASVNRQGNDVGAQYRSGIYYYNETQARLAEESKEAKQLELKEKKIVTEILPAKRFYKAEEYHQQYLEKGGGQGNKQSAEKGCTDPIRCYG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2316 197 MobiDBLite consensus disorder prediction 1 19 - -
Ssu1g2316 197 Pfam Peptide methionine sulfoxide reductase 33 176 IPR002569 GO:0008113
Ssu1g2316 197 MobiDBLite consensus disorder prediction 1 27 - -
Ssu1g2316 197 Coils Coil 128 155 - -
Ssu1g2316 197 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 10 197 - -
Ssu1g2316 197 SUPERFAMILY Peptide methionine sulfoxide reductase 25 178 IPR036509 GO:0008113
Ssu1g2316 197 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 31 175 IPR002569 GO:0008113
Ssu1g2316 197 Gene3D Peptide methionine sulphoxide reductase MsrA 18 197 IPR036509 GO:0008113
Ssu1g2316 197 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 10 197 - -
Ssu1g2316 197 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 29 187 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2316 Ssu-Chr1 65128202 65129450 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2316 K07304 - gmx:100527085 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2316 1 65128202 65129450 Ssu1g2316 1 65128202 65129450 ECH