Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2304 ATGTCCCCGGAAACATTGCGGTTTCTCCGGTTGGAACAGGGTCCGCATTTCTTGGGTGCAACTTCAACCATTTCAAGTTCGCGTCATGTGTTCAATCTTGGCATTCTCCAGGGATATAAGTTGCTATCTTTGTTCAGAGTCAAAATCTGGTGGATGATACCGCGTGTAGGGAGATCTGCAAGTGATGTTCCAATGGAAACTCAATTGCTGCTCCTGGAAGCAAGAGAAGAGACTGCGCTTGAGGATGAGGTTTCTTCTGACTCTGATGAGTCAACTACAGAAAACACCTGCTACATTCTCTTCTTGCCTGTTTTGGATGGACAGTTTCGCGCAACTTTGCAGGGAACTCAATCAAATGAGCTCCAGTTCTGCATTGAAAGTGGAGATGCCCGTGTTCAAACTTCCCAATCACTAGAAGCAGTATTTGTAAATTCAGGGGACAATCCATTTGAGTTAATCAAGAATTCTATCAAGATATTGGAGAAACACAAAGGAACTTTCTGCCATCTTGAAAACAAGAGAATCCCTGCACATCTTGACTGGTTTGGATGGTGCACTTGGGATGCTTTTTACACTGAAGTGAGTCCACAAGGAATAAGAGAGGGCCTTCAAAGTTTCTCAAATGGGGGTTGTTTGCCAAAGTTTATCATCATTGATGATGGATGGCAAGAGACGATCAATACATTTCACAAAGAAGGTGAACCAGTGATTGAGGGAACCCAGTTTGCAACCAGACTGGTAGacattaaagaaaacaaaaagttcACCAATGCAGGCTCTGACAATTCTTGTAACAATTTCCATGATTTTGTTGACTCTATCAAACAGAATATGAATGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGTGTACTCCCATCATCAGATGCAATGAAGAAATATAACCCAAAGCTTGTATACCCAATTCAGTCACCTGGTACCACAGGAACCTTAGAGATATAG 978 0.4162 MSPETLRFLRLEQGPHFLGATSTISSSRHVFNLGILQGYKLLSLFRVKIWWMIPRVGRSASDVPMETQLLLLEAREETALEDEVSSDSDESTTENTCYILFLPVLDGQFRATLQGTQSNELQFCIESGDARVQTSQSLEAVFVNSGDNPFELIKNSIKILEKHKGTFCHLENKRIPAHLDWFGWCTWDAFYTEVSPQGIREGLQSFSNGGCLPKFIIIDDGWQETINTFHKEGEPVIEGTQFATRLVDIKENKKFTNAGSDNSCNNFHDFVDSIKQNMNVKYVYMWHALAGYWGGVLPSSDAMKKYNPKLVYPIQSPGTTGTLEI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2304 325 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 11 319 - -
Ssu1g2304 325 SUPERFAMILY (Trans)glycosidases 175 298 IPR017853 -
Ssu1g2304 325 PANTHER - 11 319 IPR008811 -
Ssu1g2304 325 Pfam Raffinose synthase or seed imbibition protein Sip1 16 322 IPR008811 -
Ssu1g2304 325 Gene3D Aldolase class I 155 248 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2304 Ssu-Chr1 64983730 64986075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2304 17 321 Glycoside Hydrolase AT3G57520 51.634 2.09e-112 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2304 - - gmx:100816978 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2304 1 64983730 64986075 Ssu1g2304 1 64983730 64986075 ECH