Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2291 ATGGCGCTGCGAAACGGCGGCAGAAAGCTCCCCTTCGAGGTTCTCAGCGTCGACGACGAATCGGATCCAACCGAACGCAGCCGCAAGAAGCGCAAGCACCGCTCCTCGAAGAGGAAAAAGAAGCTTCTCGATCGCGCCGATTCCGTCGATCCGCATTCGACGCCGTTGGAAAACGGACGCGCCTGTAACGGATTCGAGCTCGACGCGAATAGGTACAGCGCTTTTGGAGGAAGCGTCGTGTGCGAGGAGGTGTGTGGAGAGAGCGTGTGTGCTGTCGCGGCGGCGTGTGAGGAGGGGAGTGAGGTTCCGACGGCCGTGCGGGGTGGCATCGATGGGTTTAATTTTGGGGAATTGAGGCAGAGGAACGTGAATTGTGGGAGTTCCGAGGATTTAGCGGCTTCGGTGGGGCGCGATGAGAGTGAGAGTGAGACGGATGGTGGTGTGAAGGCGAATACGGTGGAGAAGGCGGCGAACGAGCCTGATAGGAATGCGGTTAAGAAATTGGAGACTGTGGAATCGCTGGACTGGAGGCGTCTAATGGCGAAAGATCCGAATTATGTGTTTTCAGTGGAGAAGTCTCCTCTAACATACTTTTTGGAGGAAATGCACTATGGAAATTCTTTACGGAGCACAACAACCCTTGGGAATGAAAAAGAACGAGAGAGAGTTTATGACACTATCTTCCGCTTGCCGTGGAGATGCGAATTGCTTATAGATGTTGGCTTCTTTGTCTGCTTCGattcatttctttcattattaacTGTTATGCCAGCGAGGATCATGATGACCATTTGGAGGCTTCTAAAGACAAGGCAATTCAAGAGGCTGTCTACAGTGGAAGTTTCAGATTTTGGCTGTTTTCTTATTATGAGTTGTGGAGTGGTTCTTTTGCAGCGAACAGATATCAGCTTAATATATCATATGATCCGTGGTCAAggaacaataaaattatatgtggtCTACAATGTTTTAGAGatatttgataaattatgtcAAAGTTTTAATGGGGACGTGTTGCAAACATTATTTCTTTCTGCTGAAGGACTTGCAAATTGCCCCCCAGAGAGTATGAGATTCTGGATTTGGAGATTTATTTATGACCAAGCTTTAGCTGTGGTTGCTTCAATTGTtcattcttttatcttattagcTCAGGCAATCACTTTATCAACCTGTATAGTTGCTCACAACAATGCATTGTTCGCTTTGCTGGTGTCAAATAATTTTGCTGAGATCAAAAGCAATGTGTTTAAGCGATACAGCAAGGATAATGTTCACAGTTTAGTTTACTTTGATTCTGTTGAGAGATTCCACATTTCAGCATTTATCTTATTCGTTTTGGCTCAAAATATTCTGGAGGCAGAGGGTCCCTGGTTTGAAAGTTTTCTCATTAATATCCTCTTGGTTTATGTATGTGAAATGATTATTGATATTATCAAGCATTCATTCATTGCTAAATTCAACGACATTAAGCCCATCGCATACTCTGAGTTCCTTGAAGATCTATGTAAACAGACTCTAAATATGCAAACTGAGTGTGTAAAGAAAAACCTGACTTTTGTCCCCCTTGCTCCAGCATGTGTGGTTATTCGAGTTCTCACTCCAGTGTATGCTGCAAACCTTCCTCACAATCCTCTTCCATGGAGGCTTTTCTGGATTCTACTTTTTTCAGCAATGACCTATGTTATGCTCACAAGCCTCAAGGTTCTCATTGGCATGGGCCTACAGAAACATGCCACTTGGTATGTTAATCGCTGCAGAAGGAGGAAACATCATCTTCATGCAGATTAG 1791 0.4344 MALRNGGRKLPFEVLSVDDESDPTERSRKKRKHRSSKRKKKLLDRADSVDPHSTPLENGRACNGFELDANRYSAFGGSVVCEEVCGESVCAVAAACEEGSEVPTAVRGGIDGFNFGELRQRNVNCGSSEDLAASVGRDESESETDGGVKANTVEKAANEPDRNAVKKLETVESLDWRRLMAKDPNYVFSVEKSPLTYFLEEMHYGNSLRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTVMPARIMMTIWRLLKTRQFKRLSTVEVSDFGCFLIMSCGVVLLQRTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLCQSFNGDVLQTLFLSAEGLANCPPESMRFWIWRFIYDQALAVVASIVHSFILLAQAITLSTCIVAHNNALFALLVSNNFAEIKSNVFKRYSKDNVHSLVYFDSVERFHISAFILFVLAQNILEAEGPWFESFLINILLVYVCEMIIDIIKHSFIAKFNDIKPIAYSEFLEDLCKQTLNMQTECVKKNLTFVPLAPACVVIRVLTPVYAANLPHNPLPWRLFWILLFSAMTYVMLTSLKVLIGMGLQKHATWYVNRCRRRKHHLHAD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2291 596 PANTHER UNCHARACTERIZED 134 591 IPR008010 -
Ssu1g2291 596 Pfam Eukaryotic membrane protein family 277 582 IPR008010 -
Ssu1g2291 596 MobiDBLite consensus disorder prediction 15 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2291 Ssu-Chr1 64718878 64726246 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2291 - - gmx:100807550 1008.05