Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2261 ATGGAGTCAGATTCTGAACATCGTGAAAATAGTGATTCTACCTTTGTTTGGGATGAGGAATCGCAGCTTTTCTTCCACGCCAGTAGTGGATTTTACCATGACCCTAATGCGGGCTGGTACTACAGCAGCAGAGATGGTGCTTATTACAAATTTGAGGATGGGAATTATGTACTTTTAGGTTCCAATAAGGACGATAGTATAGAAACGTATCTGTGCAAGGAAACTACAACAGAAAATCCTCAACAAATATATGATGGTAACAACAACGAGGATTATCATTCCTTCCTTGAAAGTAAATTTGAAACTAACCAACAGACAGGAACCCTGGCTGATGAAGCAGCTGCTGATGCCACGAATTCCGTGAGTAATCCAACTTGTGAAAACCCTCCTCCACCACCATCAGAATGGTTAGAGGACACGCTTATTGATCTTTACTTATCTGGCTACAAGAACATAGCAGTTAGTGAAGCTGATGCAGTGACAGTGCCATTGGAAATAGATGATAGATATAACTCGTTAGCAGCAGATGCTTACAGCAAAACTTATGAAGTGGAAGATGAGTGGATCCCAGGCCCAGTGGATGAAAAAGGCTTAGCTGATAATAAAAGTACTGTAGATGAAGGTATAGCTTACAGCAACACTTATGAACTGGAAGAAGGTGAGTGGATTCCAGACATGGAGGACGAATATGGCATAGCTGATAGAAGTACCATAGATGAAGGTATCTTGTTGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAATCAGGGAAAGATCTGGTTTCAGAGGTTCCAATTGTGGACCTGTGGGATTGGGAAATAGTTACAGGATCCAAAAGAGATGGAAAAGATAAGGTGGCAAGGTTGGTTGGAAGACTGGTGAAACCATCTGCAAAACAACATCCATCTATCCCTTCTGGTGGAGGGAAATTAAGATCTGCTCCCATCTGTGAAGCACATCTCGATCTGGTACGAGTTAAAACAGGACAAGTGTACAGATTGCGAAATCCTAGTGCAAAATATGTGGCTAGATTATCAACTTATTATTCTTCCAATCCAACAAAACATTGGGACTTTCCCCAGCTATCATCTAATAGAAAAATCACTCGTCTCTCTAAGTCCAGTGAAAGCTCTGCTTCAGCTTCAGATGAAATTCCTATAGAGAAGGATTTGTCTGCGTTGCCAAGTCAGCTCCCTGCATCTAAGcaaataaaatatcaatacaGAGATAGGGCTGCTGAAAGAAGAATATTGCATGGTGGCTTCGGCATGGGTCCAGGACAGAAGAATCTGCCAGACATTTCTAATACGCCTTCTTCACCTGTTGCTGGTCGTCCACAAGAAGCTACATCAGTGGCCTTGGAGATGTCATTTGGAGCAGGTAGTTATGCCAGAAAACTTCTAAAAAGCATGGGTTGGAAGGAGGGGGAAGGGCTTGGCAGTTCTACCAAGGGCTTGGTGGAACCTATTCAACCAGTTGGAAACATTGGCACTGCGGGTTTGGGATGGTCTCGTTGA 1527 0.4263 MESDSEHRENSDSTFVWDEESQLFFHASSGFYHDPNAGWYYSSRDGAYYKFEDGNYVLLGSNKDDSIETYLCKETTTENPQQIYDGNNNEDYHSFLESKFETNQQTGTLADEAAADATNSVSNPTCENPPPPPSEWLEDTLIDLYLSGYKNIAVSEADAVTVPLEIDDRYNSLAADAYSKTYEVEDEWIPGPVDEKGLADNKSTVDEGIAYSNTYELEEGEWIPDMEDEYGIADRSTIDEGILLDEEKWRAQYGQVTESGKDLVSEVPIVDLWDWEIVTGSKRDGKDKVARLVGRLVKPSAKQHPSIPSGGGKLRSAPICEAHLDLVRVKTGQVYRLRNPSAKYVARLSTYYSSNPTKHWDFPQLSSNRKITRLSKSSESSASASDEIPIEKDLSALPSQLPASKQIKYQYRDRAAERRILHGGFGMGPGQKNLPDISNTPSSPVAGRPQEATSVALEMSFGAGSYARKLLKSMGWKEGEGLGSSTKGLVEPIQPVGNIGTAGLGWSR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2261 508 Pfam OCRE domain 12 53 IPR041591 -
Ssu1g2261 508 CDD OCRE 13 54 - -
Ssu1g2261 508 ProSiteProfiles G-patch domain profile. 463 508 IPR000467 GO:0003676
Ssu1g2261 508 PANTHER RNA-BINDING PROTEIN 6 506 - -
Ssu1g2261 508 Pfam G-patch domain 465 505 IPR000467 GO:0003676
Ssu1g2261 508 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 6 506 - -
Ssu1g2261 508 SMART G-patch_5 461 507 IPR000467 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2261 - - gmx:100806477 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2261 1 64098065 64102275 Ssu1g2261 1 64098065 64102275 ECH