Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2252 ATGGCAAATGCTAAGTTCGGTTCCTCCTTTTCTTGTTCAGCggcttctctttcttcttctcctttccaACGCACGAGAGGTGCCCAGttgaGCCTATCACAAGGGTTGTTTATCAACCAGCTAACTGGTGCTCAGCTGCAAATGTACACCAAAGACAAATCATGCCAGCTTAAGCTTATACATGGAATGCCGAACTTAAAAGGAAGGTTACAAAAACAGCATAATGCTCTTTTTGTTGTCTCTGAGGATCAGTCGCAATACACTGAGCTTGAAACAACTGCTCTAGTGCCAGAAAACAATGATACTATTGCAGAAGACATCTCTCCTGCAAGcaactcatattttcatttatcagGGAGTGATGGAAAATCAGGtgtaatatcattttataaccGTCCATACAGAAGGGATAGTAAGATCCTTTTATCAAATTCAGAGAGAAGTCAAAACAGCGTATTGTGGTTTATGGGGCCTGCAGTCCTCGTTgcttctttcatttttccttcACTCTATTTACGCAAAGTGCTTTCCGTCATTTTTGAGGACTCTTTGTTAACTGATTTCCTCATATTATTCTTCACAGAAGCAATTTTCTATTGTGGTGTTGCGGTATTCCTTTTTCTACTAGACCATTTAAGAAGACCCATGCTAATGGATACTGCTGCAAACAGTAGTGATACTCTACCCCCTCAATTGGGACAGAGAGTCTCTTCTGTTGCTACCCTGGTGCTTAGTCTTGTAATTCCAATGGTGACTATGGGTTTTGTCTGGCCATGGACTGGCCCTGCGGCCTCTGCAACTCTTGCTCCATACCTTGTTGGTATAGTTGTCCAATTTGCATTTGAGCAGTGTGCCAGATATCGAAAGTCACCTTCATGGTCTGCTATTCCGTTAATCTTTCAAGTGTATAGGCTTCATCAACTAAACAGAGCAGCCCAACTGGTGACAGCTTTATCATTTACAGTTAGAGGAGCTGAGATGACCTCACACAACATGGCTATAAACAGCTCTCTGGGTACCCTTCTAAATGTCCTACAATTCCTCGGTGTGATTTGCATTTGGTCCCTGTCTAGCTTCCTCATGAGATTTATCCCTTATTCTTCCACATCTATGCAGTAA 1119 0.3941 MANAKFGSSFSCSAASLSSSPFQRTRGAQLSLSQGLFINQLTGAQLQMYTKDKSCQLKLIHGMPNLKGRLQKQHNALFVVSEDQSQYTELETTALVPENNDTIAEDISPASNSYFHLSGSDGKSGVISFYNRPYRRDSKILLSNSERSQNSVLWFMGPAVLVASFIFPSLYLRKVLSVIFEDSLLTDFLILFFTEAIFYCGVAVFLFLLDHLRRPMLMDTAANSSDTLPPQLGQRVSSVATLVLSLVIPMVTMGFVWPWTGPAASATLAPYLVGIVVQFAFEQCARYRKSPSWSAIPLIFQVYRLHQLNRAAQLVTALSFTVRGAEMTSHNMAINSSLGTLLNVLQFLGVICIWSLSSFLMRFIPYSSTSMQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2252 372 PANTHER OS01G0704200 PROTEIN 4 369 - -
Ssu1g2252 372 PANTHER OS01G0704200 PROTEIN 4 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2252 Ssu-Chr1 63879265 63885003 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2252 - - gmx:100796720 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2252 1 63879265 63885003 Ssu1g2252 1 63879265 63885003 ECH