Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2244 ATGGGGTCTTTGATGAGTTCACCGAAAAGCAAAGAAGAGATGGAAGCAGCGTTGAATAAGGCTAAGGAGATAGTATCCTCTGCCCCTGTCATTGTCTTCAATAAGACTTACTGCGGTTACTGCAAGCGTGTCAAAGATCTTTTCAAACAACTAGGAGCAACCTACAAGGTCGTTGAATTGGACATAGAAAGTGATGGGGGTGAGATCCATTCAGCTTTAGTTGAGTGGACAGGACTCAGGACCGTACCTAACGTGTTTATTGGAGGAAAGCACATTGGTGGTTGTGACTCTGTTTTGGAGAAACACAGAGCAGATCAATTGGTTCCACTTCTCAATGATGCTGGGGCGATCGCCAGTAACTCTGCTCAACTCTGA 375 0.4533 MGSLMSSPKSKEEMEAALNKAKEIVSSAPVIVFNKTYCGYCKRVKDLFKQLGATYKVVELDIESDGGEIHSALVEWTGLRTVPNVFIGGKHIGGCDSVLEKHRADQLVPLLNDAGAIASNSAQL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2244 124 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Ssu1g2244 124 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Ssu1g2244 124 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Ssu1g2244 124 CDD GRX_GRXh_1_2_like 29 110 - -
Ssu1g2244 124 Gene3D Glutaredoxin 9 124 - -
Ssu1g2244 124 PANTHER GLUTAREDOXIN-C1 1 124 - -
Ssu1g2244 124 ProSiteProfiles Glutaredoxin domain profile. 18 118 - -
Ssu1g2244 124 Pfam Glutaredoxin 30 92 IPR002109 -
Ssu1g2244 124 PANTHER GLUTAREDOXIN 2 1 124 - -
Ssu1g2244 124 TIGRFAM GRX_euk: glutaredoxin 30 110 IPR011899 -
Ssu1g2244 124 SUPERFAMILY Thioredoxin-like 19 117 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2244 Ssu-Chr1 63630475 63633203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2244 18 117 Miscellaneous Gene Families AT4G15700 38.000 4.67e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2244 K03676 - qsu:111991481 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2244 1 63630475 63633203 Ssu1g2244 1 63630475 63633203 ECH