Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2242 ATGAATGGCCGAGGCGAAGTTGGTTCACCGGATCCGTTGGATTCGTTCCCTCCGTTACGGGTTCGGGAATCGGACGGTGCCTCGCGCCACTCTTCGTGCGGCGGCGATTCCGAGTTCGAGCGCTATTGCAGCGCCAACTCGGTGATGGGAACGCCCAGCACCGGCGTGAGCCTGTGCAGCGCCGTCACGCTGTTCCACGATTTCCCCGATTGCGATTTCGCGTCTACGGAGGGCCTCGAGAATTTCAGTCTGGGAAGAGGAACGGCGGATACGAATCGCGGCGGCGGCGACCGGAAGCGGAGTCTGAGGTACGGTTCCACTGGATTGGAGCTGTACGGTGATTGCAGTGACGAACTCGCTATCACTGATCTCGATTCGTCGGAGTTAATCGGTTTCAACCGGACCGAAGGGTCCAATGGGAACAACGAAGTGACTGTTGGAGAAGGTGGTGGAAATGGTATTGAATTGGAAATTGgaataagagaagaagaagaacaacaacaacaagaagatgaagaggaagaagagttATCAGAGGGTGATGATTCTATGTATAATTATGgtagtgatggtgatggtggaaATGAGACGTATTTGTCGAGAAGTATAGGTTATTATGAGGAGCCGGAAGTGGAAAAAGAGAATCCTCTGTTTTTGAACTCTTCTGTGGCCTTTGGTTCCCGAGACTTGGATGATTTTTTGCTGCAAAGTGGTAATATTCCTGTCGTGTCCGATATATTTCGCGATCGGCGGGAAAAGAATGATCGAGTTAAAGAGGATATCGTGAATTCTGGTTCTGTGAGTTCCAAGGGTTCTGGTCGGAAAGAGGAAGGGAAAGATGAAAAGGACATGGTTGGAGGCAATGAATTTGAAGAAACTAAAGATATTGGTTGTTCTGCTGCTGTAGAAGAGGTTAGGGACAGGGGAGTTGATATGCTTGCTAACTTGGAAGAAATTTCTCCCTCAATTGATTGTCAGAAGAGTGTTGAAACACAGGTCCAAGGTTCTGATGATCTGGTTAGTTGTCCTAAAACTTCTTCTGTTGCCAAGGTGGATGAAGTTGATGTGGATCTGCCGGCGAGAGAAGCTCCTCGGAATGTGGGTTTGGATGTTACTGATGGTGGTAGCGTGGAAAACCGGAATGCCAACAGTGAAGAAGCTATTGCCACTAGTGATGCTCATGGTGTAAAGTTGGAGCTGGATGATTCTAAGTTCAAGTTTAATCACTTAGGTGATAgtcaatttgataaaaattctTCCAACCATCTTGGGAATGTTAATGCAAAATCATTTGAGAGCCTTGAACAAATTGTGCCGCTGTCAGACACTGGAATGAGGAAAACATTAGAGAGCTCTTCCACTTCAATAAATCTCTTAGAAAAAAGTCCTGTGGTATCTAAGATAGAAGACTTTGAGCTAAATGAATTCTATGACGAGGTTGTTCAGGAAATGGAAGAAATTTTACTGGAATCTGTGGATTCTCCTGGGGCTAGGCTTTCCATGGGTAACAGATTGGTTGAGCCTCAATTTTCTATGCCTTCAAGAGATGGTGGGTTGACTGCTTCTACTTCTAGTACAGATGATGCTTACCTGCTAGTTCAGCACCCTAGAAGAATAGATAGGATTGAAGTGGTAGGTGCAAGGCAGAAGAAAGGGGATGTTTCTTTCAGTGAAAGATTGGTTGGGGTGAAGGAATATACTGTGTACAAATAA 1713 0.439 MNGRGEVGSPDPLDSFPPLRVRESDGASRHSSCGGDSEFERYCSANSVMGTPSTGVSLCSAVTLFHDFPDCDFASTEGLENFSLGRGTADTNRGGGDRKRSLRYGSTGLELYGDCSDELAITDLDSSELIGFNRTEGSNGNNEVTVGEGGGNGIELEIGIREEEEQQQQEDEEEEELSEGDDSMYNYGSDGDGGNETYLSRSIGYYEEPEVEKENPLFLNSSVAFGSRDLDDFLLQSGNIPVVSDIFRDRREKNDRVKEDIVNSGSVSSKGSGRKEEGKDEKDMVGGNEFEETKDIGCSAAVEEVRDRGVDMLANLEEISPSIDCQKSVETQVQGSDDLVSCPKTSSVAKVDEVDVDLPAREAPRNVGLDVTDGGSVENRNANSEEAIATSDAHGVKLELDDSKFKFNHLGDSQFDKNSSNHLGNVNAKSFESLEQIVPLSDTGMRKTLESSSTSINLLEKSPVVSKIEDFELNEFYDEVVQEMEEILLESVDSPGARLSMGNRLVEPQFSMPSRDGGLTASTSSTDDAYLLVQHPRRIDRIEVVGARQKKGDVSFSERLVGVKEYTVYK 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2242 570 Coils Coil 156 180 - -
Ssu1g2242 570 MobiDBLite consensus disorder prediction 164 181 - -
Ssu1g2242 570 MobiDBLite consensus disorder prediction 272 292 - -
Ssu1g2242 570 MobiDBLite consensus disorder prediction 162 199 - -
Ssu1g2242 570 MobiDBLite consensus disorder prediction 1 37 - -
Ssu1g2242 570 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 49 570 - -
Ssu1g2242 570 MobiDBLite consensus disorder prediction 253 292 - -
Ssu1g2242 570 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 49 570 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2242 - - gmx:100800081 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2242 1 63604582 63606926 Ssu1g2242 1 63604582 63606926 ECH