Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2227 ATGACTACTCAATCCCCTTTTCCTCCCATTTCCACACCTCAAAACACAGGTGGTGAAAATGCACAACCGGAAAATGTGGATCAGCATAATGCTGGGGAAGAGCTTGTTAAACAGAGTTCAAACACGTCGGTGTTTGTGAACTCGGAACCAATGCGCGAGGAGCAAATTCAGAATGCTGTGAAATTTCTATCACACCCGAAAGTTAGTGGTTCTCCTGTCGTCCACAGGCGATCGTTTCTGGAGAAGAAGGGCCTCACGAAGGAGGAGATAGATGAGGCCTTTCGCCGTGTGCCTGATTCACCTCCAAGTGTGCAGACAGCTGGTGTAAATCAAGATGGACAATTGAAGCCATCATCAGACATTCAGAAACAAGGCCAACCACAGGCTTTGCGGCCGACTGTACCAGCTTCTACTGGTGTTACTACTTCACTGGGAACCTTATCACGCCGCAGTTTTCGCTGGTCGCATGCCCTTGTTGCAGTTGGATTACTAGCTGCTTCAGGTGCTGGTACAGTTATGCTAATTAAGAAATCTGTTCTCCCTTCGTTAAAATCCTGGATACGCAATGTTGTCCTAGACGAGGAATATGACCAATTAAAGGGAACAGGCTCAAAACCAACGTTGGCAGAAGAAGCTGCACAGGCAGCAAAAACAGCTGCAGTTGCAGCTGCTGATATTGCAAAAGCAAGCCAAGAACTACTGACTTCAAAAATTGAAGAGAAGAGATATTTTGTAGAAGTTGTGAGCCTTTTGGATAAGCAAGTGCAGGAGATGAAGTTGATGACTAATGCAATAACAAGACTGGAAGCTTCTGGTGGACTCTCTGTCTCAAAGCAAGAAGATCGCCAAGTCACTCAAACAAGTTCAAAGataCAGCAATTGATCGTGAATGGGAAGTCAGACTACGAGTCCCTATCAGTGAGATCTTCATCCCCTCCTGTATCTGTTGAACCATCTAGTGCTCCTCATCCAAAATCATATATGGAGATAATGGCCATGATCCAAAGAGGGGAGAAGCCTTCTAACATAAGAGAAATTGACTGA 1044 0.4531 MTTQSPFPPISTPQNTGGENAQPENVDQHNAGEELVKQSSNTSVFVNSEPMREEQIQNAVKFLSHPKVSGSPVVHRRSFLEKKGLTKEEIDEAFRRVPDSPPSVQTAGVNQDGQLKPSSDIQKQGQPQALRPTVPASTGVTTSLGTLSRRSFRWSHALVAVGLLAASGAGTVMLIKKSVLPSLKSWIRNVVLDEEYDQLKGTGSKPTLAEEAAQAAKTAAVAAADIAKASQELLTSKIEEKRYFVEVVSLLDKQVQEMKLMTNAITRLEASGGLSVSKQEDRQVTQTSSKIQQLIVNGKSDYESLSVRSSSPPVSVEPSSAPHPKSYMEIMAMIQRGEKPSNIREID 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2227 347 MobiDBLite consensus disorder prediction 302 316 - -
Ssu1g2227 347 Coils Coil 251 271 - -
Ssu1g2227 347 MobiDBLite consensus disorder prediction 302 324 - -
Ssu1g2227 347 MobiDBLite consensus disorder prediction 103 141 - -
Ssu1g2227 347 Gene3D - 44 106 IPR036388 -
Ssu1g2227 347 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 3 346 IPR025655 GO:0005515|GO:0005778|GO:0016560
Ssu1g2227 347 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 3 346 - -
Ssu1g2227 347 Pfam Pex14 N-terminal domain 52 96 IPR006785 -
Ssu1g2227 347 MobiDBLite consensus disorder prediction 1 50 - -
Ssu1g2227 347 MobiDBLite consensus disorder prediction 96 141 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2227 K13343 - gmx:100807229 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1371 6 22512619 22542335 Ssu1g2227 1 63173734 63177342 PCT