Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2226 ATGGCAAAGCAGTCATCTGAGCTGGCCATTGAAGAGCTGAAGAAGCTTCTCAGAGAGAAGGAAGAACTTAATGAAGTGGCAGCCGCAAAAGTTGAGGAGCTTATAGCTGAGTTGCAGGGAAGTCATCTGCGTCCATATGAGCATGCTGTGCAAAGAATCATTGACGGATTTACTTACTTCAAGTTCAACAATTTCGACAAGAACCCGGATCTGTACGGCCAACTTGCTAATGGCCAAAGCCCACAGtATCTGGTGTTTGCTTGCTCTGACTCTCGTGTGAGTCCTTCTATTATCCTGAACTTCCAACCGGGGGAAGCTTTCATGGTCCGCAACATTGCTAACATGGTTCCTCCATTTAATCAGCTAAGGTACAGTGGAGTTGGTGCAGTCATTGAGTATGCTATCACGGCTCTTAAGGTGCCAAACATTCTGGTCATTGGACATAGTCGCTGTGGCGGAATACAAAGGCTTATGAGTCATCCAGAGAATGGTTCTGCTCCCTTTGACTTCATAGACGATTGGGTGAAAATTGGTTTGCCTGCCAAACTCAAGGTTCTGAAAGAATATGAAGACTATGATTTCGAAGAACAATGCAAATTCTGTGAAAAGGAGTCAGTGAATAACTCGTTAGTGAACCTGAAGACATATCCTTATGTTGAAAGAGGAATAAGGGACAAGAGCATAACGCTGTTGGGGGGTTACTATGATTTTGTGATTGGAGAATTCAAACTTTGGAAGTACGAATCTTACATCACTAAACCCATTACCATCCCTCCCTCTACCCATTAG 789 0.4385 MAKQSSELAIEELKKLLREKEELNEVAAAKVEELIAELQGSHLRPYEHAVQRIIDGFTYFKFNNFDKNPDLYGQLANGQSPQYLVFACSDSRVSPSIILNFQPGEAFMVRNIANMVPPFNQLRYSGVGAVIEYAITALKVPNILVIGHSRCGGIQRLMSHPENGSAPFDFIDDWVKIGLPAKLKVLKEYEDYDFEEQCKFCEKESVNNSLVNLKTYPYVERGIRDKSITLLGGYYDFVIGEFKLWKYESYITKPITIPPSTH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2226 262 PANTHER CARBONIC ANHYDRASE 1 257 - -
Ssu1g2226 262 Coils Coil 3 37 - -
Ssu1g2226 262 SUPERFAMILY beta-carbonic anhydrase, cab 35 250 IPR036874 GO:0004089|GO:0008270
Ssu1g2226 262 Gene3D Carbonic anhydrase 11 257 IPR036874 GO:0004089|GO:0008270
Ssu1g2226 262 SMART Pro_CA_2 76 246 IPR001765 GO:0004089|GO:0008270
Ssu1g2226 262 Pfam Carbonic anhydrase 83 241 IPR001765 GO:0004089|GO:0008270
Ssu1g2226 262 CDD beta_CA_cladeB 56 245 IPR045066 GO:0004089|GO:0008270
Ssu1g2226 262 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 88 95 IPR015892 GO:0004089|GO:0008270|GO:0015976
Ssu1g2226 262 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 132 152 IPR015892 GO:0004089|GO:0008270|GO:0015976
Ssu1g2226 262 PANTHER CARBONIC ANHYDRASE 1 257 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2226 Ssu-Chr1 63119985 63123344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2226 K01673 - gmx:547671 442.965