Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2221 ATGGTGTTGGCGGGTGTGTCCCAGGCCATCTCTATTTCCATCTCCACCGCCTGCAGAACCCCCTCTTGCTTCGATTTCCACCCCAAAAAACCACCCTCTTGCAATTTGGGCCTGGCCCACCTTCTCCAGCCCAATGTTTCAATCTCCTCCAGAAGGAACCGCAGCGGCAACACGCACTGTTGCCGCTGCACCCTCAATTCCGACGACACTTGCCTCAACTGGGATTGGAACCGATGGTGCCGCCATTTCGCGGAAATCGAACAGGCCGAGAATTTCGCCTCTGTCCTCAagTTTCAACTTGACGATGCTATTGAGAAGCAGGACTTTCAAGAAGCGATTAAGTTGAAGAGTGCCCTAGCGGAAGCAACGTCCAAGGACACTGTTGCTGAAATTATGGCTCAGTTGAAGAGTGCTATAGATGATGAACGATACCATGATGCTTCGAGATTGTGTAGATACACCGGAAGTGGACTGGTGGGTTGGTGGGTAGGGCACTCAAAAAGTATAGACGACCCCTTTGGTAGAATTATACATGTAAGTCCTGCTATGGGTAGATTCATTGGCAAGAGTTACAGTCCAAGACAGTTGATCGCAGCATCTTCTGGGACtccaatttttgaaatttatgtggTAAAAAATGCTGATGACACGTATCATATGCAgGTAGTGTATTTACGACAAGCCAAAGGAAAGTCAAGGAGAAATCCTCCATCTGTACCTGCTAAAGGCCCATCCAAACCTGAAGTGGAGAATGCATCTTCAGGTGAAGTGCAGGAACATAAAGAGAAGTTAGAAAGAAATGATGAGAAAAACAGTAATATCGAGGGAGCAACTGAGGAGGGCATTAAAAGTgtcataaattttcttaaagaaaaaattccaGGATTGAAAATCAAAGTTATGAATGTTAATGTTGAAGAGGAAGCAGCAGAAGACAATGATTCTATTAAGCAAATGATGGAAGAAGATAGTAAAACAGGCTCCAGTGAGAATCATGAAGAGGAAGTTAATAATCTGGATGAACCTGATGAGGTCACTCTAGAAAGAGATGGAGATGTCACAGGAGAAGAAAAGGATTTGGATATGAAGCTTTTTATTGGCGGGGTTGTACACAACAATGAAGATACTTCTGTCAAGGATGAATTTATACGTCTTCCAGCTGTAATAAACAATATGGAAAAGGATTCttttgtctttcaattttctaGGAGAAATCTAGATTATGGTATGAGAGAAGATAAAGTTCCTGATATCAAAGTGGCAGCTCTAGCAGCACAAGGAGTCTCAGAGCTTATGCCTCCTGATGTTGCTAAGGTATTTTGGGGTTCTGACAAAGTCTCTTCAAAGGTCTCCAAAAACATGCGTGAAATTGTCAGACTTGCTATTAGTCAAGCACAGAAAAGAACTAGATTATGTGGGGATACACATTTTAGCCGGATTACCTGTTCAAAAGGGGATTTTGATCCTTTTGATGGACTCTATTATGGTTCATTTGGCCCTTACGGCATTGAAATAGTGCTATTGAGGCGGAAATTTGGACATTGGAATGAAGTGGACAATGAAAACAACACTTCAGATGTGGGATTCTTTGAATATGTTGAGGCTGTGAAGTTAACTGGGGATCTTAATGTTCCTGCTGGCCAgGTGACATTCCGTGCTAAAATTGGCAGAGGCAAACGCAACACCAACCGTGGGATGTATCCTGATGAATTAGGAGTGGTAATTCACTATATAAGTGGATGTCTCTGTGTGTGTGGGTCCTCCTTGATGTCGGAACAtgcttattttcaaatttcacttCAACCCATCATACTGCACCTTTTCCCTaacaatcttttattttataaccttaCACCTGCCGTCCCTCATAACTTTGTGTTCTATTCAAGTCCTATTTTGTGCCACTGCAGAGTGCAGTACTCTGCCCAGTGCCCACTATTAATGATAAATACTCAAATCTCCCAACTTCTTCAGTAG 1977 0.4117 MVLAGVSQAISISISTACRTPSCFDFHPKKPPSCNLGLAHLLQPNVSISSRRNRSGNTHCCRCTLNSDDTCLNWDWNRWCRHFAEIEQAENFASVLKFQLDDAIEKQDFQEAIKLKSALAEATSKDTVAEIMAQLKSAIDDERYHDASRLCRYTGSGLVGWWVGHSKSIDDPFGRIIHVSPAMGRFIGKSYSPRQLIAASSGTPIFEIYVVKNADDTYHMQVVYLRQAKGKSRRNPPSVPAKGPSKPEVENASSGEVQEHKEKLERNDEKNSNIEGATEEGIKSVINFLKEKIPGLKIKVMNVNVEEEAAEDNDSIKQMMEEDSKTGSSENHEEEVNNLDEPDEVTLERDGDVTGEEKDLDMKLFIGGVVHNNEDTSVKDEFIRLPAVINNMEKDSFVFQFSRRNLDYGMREDKVPDIKVAALAAQGVSELMPPDVAKVFWGSDKVSSKVSKNMREIVRLAISQAQKRTRLCGDTHFSRITCSKGDFDPFDGLYYGSFGPYGIEIVLLRRKFGHWNEVDNENNTSDVGFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGKRNTNRGMYPDELGVVIHYISGCLCVCGSSLMSEHAYFQISLQPIILHLFPNNLLFYNLTPAVPHNFVFYSSPILCHCRVQYSAQCPLLMINTQISQLLQ 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2221 658 MobiDBLite consensus disorder prediction 308 354 - -
Ssu1g2221 658 Coils Coil 257 280 - -
Ssu1g2221 658 PANTHER PROTEIN EXECUTER 2, CHLOROPLASTIC 56 577 - -
Ssu1g2221 658 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 56 577 IPR044680 GO:0010343
Ssu1g2221 658 MobiDBLite consensus disorder prediction 308 335 - -
Ssu1g2221 658 MobiDBLite consensus disorder prediction 228 276 - -
Ssu1g2221 658 MobiDBLite consensus disorder prediction 253 276 - -
Ssu1g2221 658 Coils Coil 302 322 - -
Ssu1g2221 658 Pfam Cyclin D1 binding domain 477 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2221 Ssu-Chr1 63015916 63021005 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2221 - - gmx:100786321 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2221 1 63015916 63021005 Ssu1g2221 1 63015916 63021005 ECH