Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2205 ATGATTCCTGTTGCTAATCATCATCAACATGACCACCTAAAAGCAGATCTAGTTTTCTTTGAAGAAGAATTTAGGCCCGGCATGAAAGTGGATGTGCACTTCCCTAAAAGAAGATATGCAACCCCACTGTTGCCTTGCCAAATTGCACAACGCATACCATTCTCAtcagaaaagataaaagaaatatttgatatgttttttgTGAAACCAAAGTCAAAGAATGTTGAGGTTGTAGAGAAAGCCATTAGTGAATATGAAGCACTTCTGATACTGATGACAGCTCATGCTGCCTTACCTCCAGAAGTTTACTGGGAAAGGATGCTTCCAAATATCCCAATGCCGAAAGCAATCAAAGGCCTTCTCAACCTTGAGTCACAGTTTCCTTTCACTAAGTATGGTGAAAAAAGGACTCTTTCACAAGATGATCAATTTCCTGTCTATGGTGCTATGGACTCTCAATCCCACAATGATGCAAATGCTCTTCCTCCAAAGATGATCCTTGTTACTAATCATCGTCAACATGACCACCCGAAAGCATATCTAATTTTCTTTGAAGAAGGATTAAGGCCTGGCACAAAATTGGATGCGCacttcaataaaagaaaatatgcatCCCCATTGTTGCCTCGCCAAAATGCACAACGCATACCGTTCTCATCAAAAAAGATAAACGAAATATTGGATATGCTTTTTGTGAAACCAAAGTCAAAGAATGTTGAGGTTGTAGAGAAAGCCATTAGTCAATGTGAAGCACCTGTAATAAATGGAGAGGAAAAACATTGTGCAACTTCATTAGAATCCATGGTGGATTTTGTCACTTCTAAGCTTGGGAAGAACGTCCATGTTATTTCTACAGAGGCGGAAAAGGAAACTAAGTCCCAAAAATTCTCAGTGAAAGATGGGGTGAAGATGTTAGCAGAAGATAAGGTCATTGCTTGCCATCCTATGAATTACCCATATGTTGTCTTTTATTATCTTGAGATATTAAATACTACTGGGCATTTTATGCCTTTGAGGGAGAAGATGGGACTAGAGTTAAAGCTATAA 1047 0.3744 MIPVANHHQHDHLKADLVFFEEEFRPGMKVDVHFPKRRYATPLLPCQIAQRIPFSSEKIKEIFDMFFVKPKSKNVEVVEKAISEYEALLILMTAHAALPPEVYWERMLPNIPMPKAIKGLLNLESQFPFTKYGEKRTLSQDDQFPVYGAMDSQSHNDANALPPKMILVTNHRQHDHPKAYLIFFEEGLRPGTKLDAHFNKRKYASPLLPRQNAQRIPFSSKKINEILDMLFVKPKSKNVEVVEKAISQCEAPVINGEEKHCATSLESMVDFVTSKLGKNVHVISTEAEKETKSQKFSVKDGVKMLAEDKVIACHPMNYPYVVFYYLEILNTTGHFMPLREKMGLELKL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2205 348 Pfam BURP domain 18 86 IPR004873 -
Ssu1g2205 348 Pfam BURP domain 182 339 IPR004873 -
Ssu1g2205 348 ProSiteProfiles BURP domain profile. 182 348 IPR004873 -
Ssu1g2205 348 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 93 338 IPR044816 -
Ssu1g2205 348 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 9 87 IPR044816 -
Ssu1g2205 348 PANTHER BURP DOMAIN PROTEIN RD22 93 338 - -
Ssu1g2205 348 PANTHER BURP DOMAIN PROTEIN RD22 9 87 - -
Ssu1g2205 348 SMART BURP_2 180 346 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2205 Ssu-Chr1 62605765 62615812 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2205 - - gmx:100786660 275.404