Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2202 ATGAGTGCGAATAAGATATCTGGAGGCTCTTCACGGCATCGAAAATCCGTTAATGGATTTGCAGGTTCAAGTCCATCCGGAGGGCAAAGGGAAACTGGATCAAGTAGGAATTCTTCCTTGCACAAAAATTTAACTTCAGAGAAAATATCTCAACCTGGACTAATGGAGAAGGCAGTTGATGGAACTTCTCTTGAAGTAAATACGCCCAAGCTGATTGTTAAAATTCCAAACCAAGGTAGAAGTCCTGCCCAAAGTGCCAGTGCTGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCCTCATCTCCGGTCCTTCCAGAGAAGCATGATCAGTTTGATCACTGCTCGAAGGAAAAGAGCGACTTTTATCGAGCCAATATTGGCTCAGATATTAATACTGAATCTTGGCAGAGTAATGATTTCAAAGACGTATTGACTGGCTCTGATGAAGGTGATGGATCACCGGCCGCAGTTACTGATGAAGAGCGCTGTCGGACTGGCAATGATTGTAAGAAAACAATGGAGGTATCAAAAGCTGCTTCCTCATCATCTGGAAATGAACATAAAGCTGGAAATTTGCAGGATGCTTCTTACAGGtcaataaatgctttaattgaAGGTGTTAAGTACTCTGAAGCCGATGATGTTGGAATGAATCTCCTTGCTAGTGTGGCTACTGGAGAGATATTGAAATCTGAATTGTTAACTCCGGCTGGATCTCCAGAAAGAAAGACTACTGCTGTTGAACAGTCATGCACAGGCAATGGTGTTGTTAAGTCCTCTGAAGAAAATCTTGTCCGGGATGAATGCCACTCAAATAATGGTTTTGGTGGTGAACATAAGAATCAGGGTTCTGTAACAGGGGATTTAGGGgcaaatgatgaaaatgattctgattttcaagCATCTGGAGGGAAAGCCGCGAGAGAGCTAAATAAGTGTGTTAATGCATGTAGTATGGATTTGCATCAGGTTACTGAAACTATTGTAGAAAGCAAaggaaaattaaatgaaaaatctgATCCTGCTTCATTGGGTGGCCTTTCTGAAAGTACCGAACATGAAGCTAGAGATGGTGACAGAAGCAAGCAGCTCCAGGAGGTTGGTTGGGGAGTGAATGCTGGTGAAATTCTTGATGTTAAGGTCAGTTGTGTTGCAGGAGTTGAGGCAGAAGCAACTGAAAAATTGTCACATATTGCTGTGAAAGTGGATGTACAGAGTGATAACTATACTGCTGAAGGATCAAATGGTGGTGGACAGACAGCTAAAAAGCCTCCTGTTATTCTTGTGCAGTCTGATTCGGCGAGAGGAAAAGATGAGAATGTACTCCATTCTTCTGGATATAGTGTTGATAAGGTTCCTGAAGACTTCACTGAACGGGAATCTGAAAAAGCTGATGATATCAATGCTGAGAATCATGCTAGTCAGTCTAAAAAGCAAAGAAATGAGTGTGAAACTGATGTCTTGACAATGCCTGAGAATAGAGGCTTATGTTCTACTGTCACTGGTCTTGCTGCTGAATGTGTGGAGgagaatttagaaatgaaagAGGTTCATGACCAACCTGCCAGAGAGGAACTTCCCAAAGATTCACCTAGCGTTCGTTCACAAGAAATGGATAAGCATCTTGATTCTAAAGGATCAAAATTGACTGGCATGGATGCACAGGAGGCTGAGGAGTGCACCTCTAGCACTGCCGATGCATCTTCCATGTCTGCTGTGGCTGTGTCAGATGCAGATGCAAAGgttgaatttgatttaaatgaaGGGCTCATTGCAGATGATGGAAAATGTGGCGAGTTCAACAGCATTGCCACTTCTGGATGTGCACCTGCTGGTCGATTGATCAGTCCTGTGCCATTTCCTGCTTCATCTATGTCTTGTGTTATTCCTGCTCCGGTCACTGTGGCTGCTGCTGCAAAGGGGCCCTTTGTGCCACTTGATTTATTGAGAAGTAAAGGGGAAATTGGTTGGAAGGGATCAGCTGCGACTAGTGCATTCCGGCCAGCCGAGCCCAGGAAAGTTATGGAAATGCCTCTTGGTACACTAACCACCCCTATTTCTTGTGCTGCAGCTGGAAAACAGAGTCGAGCACCATTGGATATTGACTTGAATGTGCCTGATGAAAGAATACTTGATGATATTTCTTCTCAAACCTGTGCTCGTCACACAGATTCTGTATCTCTTGCAGCTGATGGTCATGATCCTGTACGCAGTAAAATGGCTTCACCTGTTCGCTGCTCTGGAGGGCTTGGTCTTGACTTGAACCAAGTGGACGAAGCTTCTGATGTGGTCAATTGCTCCACAAGCAGTAATCTTAAAGTTGATGTGCCAATTATGCAGGTGAAGTCATCATTGGGTGGTCCACCAAATAGAGAAGTGAATGTCCACAGGGACTTTGATTTGAACAATGGACCTTCAGCTGACGAAGTCACCACCGAATCCTCATTGTTTTCTCACCATGCCAGGAGCAGTGTGCCATCTCAACCACCTGTTTCTGGACTTAGGGTGAGTACTGCTGAGCCAGGCAACTTCTCTTCTTGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTTACAATATCTTCAATCATGCCTGATAGAGGGGATCAGCCCTTTTCAATTTTTGCCCCAAATGGGCCACAAAGGTGGTTGACTCCTGCTGCTGGTGGCAACTCATTTGGACCTGACATTTATAGGGGTCCAGTATTGTCATCTTCTCCTGCAGTGTCATATGCATCTGCTCCATTTGAATATCCTATCTTCCCGTTTAATTCCACCTTTCCTCTTCCATCAGCATCTTTTTCTACTGGATCAGCTACTTATGTATATCCAACATCAGGCAATCGGCTTTGCTTCCCTGCGGTAAATTCACAGTTAATGGGGCCTGCTGGCGCAGTTTCATCTCATTACCCCAGGCCTTATGTTGTTGGCCTTACAGAAGGTAGCAATAGTGGTAGTGCTGAGACCAGCAGAAAATGGGCAAGGCAGGGTTTAGATCTTAATACTGGACCTGGAGGTTCAGACATAGAGGGGAGAGATGAGAGTTCACCTCTTCCATCTAGGCAACTGTCTGTTGCTAGTTCACAGGCCCTAGCTGAGGAGCATGCAAGGATCCAGCTGGCTGGTAGTGTTCGTAAGAGGAAGGAGCCTGATGGTGGGTGGGATGGCTACAACCAATCCTCATGGCAATAG 3198 0.4387 MSANKISGGSSRHRKSVNGFAGSSPSGGQRETGSSRNSSLHKNLTSEKISQPGLMEKAVDGTSLEVNTPKLIVKIPNQGRSPAQSASAGSFDDPTIMNSRASSPVLPEKHDQFDHCSKEKSDFYRANIGSDINTESWQSNDFKDVLTGSDEGDGSPAAVTDEERCRTGNDCKKTMEVSKAASSSSGNEHKAGNLQDASYRSINALIEGVKYSEADDVGMNLLASVATGEILKSELLTPAGSPERKTTAVEQSCTGNGVVKSSEENLVRDECHSNNGFGGEHKNQGSVTGDLGANDENDSDFQASGGKAARELNKCVNACSMDLHQVTETIVESKGKLNEKSDPASLGGLSESTEHEARDGDRSKQLQEVGWGVNAGEILDVKVSCVAGVEAEATEKLSHIAVKVDVQSDNYTAEGSNGGGQTAKKPPVILVQSDSARGKDENVLHSSGYSVDKVPEDFTERESEKADDINAENHASQSKKQRNECETDVLTMPENRGLCSTVTGLAAECVEENLEMKEVHDQPAREELPKDSPSVRSQEMDKHLDSKGSKLTGMDAQEAEECTSSTADASSMSAVAVSDADAKVEFDLNEGLIADDGKCGEFNSIATSGCAPAGRLISPVPFPASSMSCVIPAPVTVAAAAKGPFVPLDLLRSKGEIGWKGSAATSAFRPAEPRKVMEMPLGTLTTPISCAAAGKQSRAPLDIDLNVPDERILDDISSQTCARHTDSVSLAADGHDPVRSKMASPVRCSGGLGLDLNQVDEASDVVNCSTSSNLKVDVPIMQVKSSLGGPPNREVNVHRDFDLNNGPSADEVTTESSLFSHHARSSVPSQPPVSGLRVSTAEPGNFSSWLPSSGNTYSAVTISSIMPDRGDQPFSIFAPNGPQRWLTPAAGGNSFGPDIYRGPVLSSSPAVSYASAPFEYPIFPFNSTFPLPSASFSTGSATYVYPTSGNRLCFPAVNSQLMGPAGAVSSHYPRPYVVGLTEGSNSGSAETSRKWARQGLDLNTGPGGSDIEGRDESSPLPSRQLSVASSQALAEEHARIQLAGSVRKRKEPDGGWDGYNQSSWQ 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 454 485 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 273 303 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 807 838 - -
Ssu1g2202 1065 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1065 - -
Ssu1g2202 1065 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1065 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 334 365 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 1 50 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 1 114 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 434 485 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 516 549 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 78 102 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 1041 1055 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 983 1065 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 805 838 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 516 555 - -
Ssu1g2202 1065 MobiDBLite consensus disorder prediction 277 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2202 Ssu-Chr1 62555824 62559021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2202 - - ccaj:109810746 1774.6