Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2189 ATGAAGCTTCCATTTCCCGCCATTTTtctcatcttcatcttctcaATCCCTTCATCCACCGCCGGCGCCGGCGTCGACACTATTTCCCGCCTTATTCGGATCCAAGACCGCGAGAGGGCTCCCCCTTCCGTCCAGGAAGCCGCCGCGCGCGGCGTCCTCCTCCGCTTGCTGCCTTCTCACTCCTCCAGCTTCCACTTCCGGATCGTCTCCAAGAAGCAGTGCGGTGACGAATATTGCTTCGCGATCAAAAACCATCCTTCTTTCACAACGCCAGGGGATCCTCAAATTCTAATTGAAGGCACAACTGGAGTGGACATTGTGGCCGGTCTGCACCGGTATCTGAAGCATTGGTGCGGTTCACACATATCATGGGACAAAACCGGTGGCTCGCAACTATTTTCCGTGCCCAATGCGGGGTTTCTCCCGCGTGTTCACCACGCTGGGGTCTCTGTTCAGAGGCCTGTTCCATGGAGCTATTACCAAAATGCGGTTACATCTAGCTATTCTTTCGCTTGGTGGGACTGGGAAAGATGGGAAAAGGAAATTGATTGGATGGCTCTGCAGGGTGTCAACTTGCCACTTGCATTTACTGGACAAGAGGCTATCTGGCAGAAAGTGTTCCAGGAGAAATTTAACATGAGCATTTCTGATTTGGATGATTTCTTTGGAGGCCCCGCATTTCTTGCATGGTCACGTATGGGGAATTTACACGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATCAACAATTAATCTTACAGAAGAAAATTCTTGCCAGAATGTATGAACTTGGAATGACACCAGTGCTGCCAGCTTTTTCTGGAAATGTCCCTGCTGCACTGAAATATATATTTCCATCAGCAAAAATAACACACTTGGGAAATTGGTTTTCTGTCAAGAATGACCGCAAATGGTGCTGCACCTATCTTCTTGATGCAACTGATTCTTTGTTCATTGAGATCGGGAAAGCATTCATTGAGCAACAACTGCTAGAGTATGGAAGAACCAGCCACATTTACAACTGTGATACTTTTGATGAGAACACCCCGCCCATTGATGATCCAGAGTACATTTCATCATTAGGTGCAGCAATTTTTAAAGGAATGCAGAGCGGTGATGATGATGCTGTTTGGCTAATGCAGGGATGGCTATTTTCATATGATCCATTCTGGAGACCTCCTCAAATGAAGGTTATATTCATATCTTTGACCTCCCAACTATATTGCTTGTTTTTACAGCAAGCCTTAAAATAA 1257 0.4646 MKLPFPAIFLIFIFSIPSSTAGAGVDTISRLIRIQDRERAPPSVQEAAARGVLLRLLPSHSSSFHFRIVSKKQCGDEYCFAIKNHPSFTTPGDPQILIEGTTGVDIVAGLHRYLKHWCGSHISWDKTGGSQLFSVPNAGFLPRVHHAGVSVQRPVPWSYYQNAVTSSYSFAWWDWERWEKEIDWMALQGVNLPLAFTGQEAIWQKVFQEKFNMSISDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITHLGNWFSVKNDRKWCCTYLLDATDSLFIEIGKAFIEQQLLEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAAIFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKVIFISLTSQLYCLFLQQALK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2189 418 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 39 401 - -
Ssu1g2189 418 Gene3D Glycosidases 154 408 - -
Ssu1g2189 418 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 159 402 IPR024733 -
Ssu1g2189 418 Gene3D - 23 147 IPR029018 -
Ssu1g2189 418 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 47 138 IPR024240 -
Ssu1g2189 418 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 39 401 IPR007781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2189 Ssu-Chr1 62232667 62239263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2189 K01205 - gmx:100791160 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2189 1 62232667 62239263 Ssu1g2189 1 62232667 62239263 ECH