Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2185 ATGGTAGCTGCAAATGAGAGGGTCGTCGCTGTGATTATGGTTGGAGGACCCACTAAAGGTACTAGATTCCGGCCATTGTCACTGAACATACCCAAGCCACTATTTCCATTAGCAGGACAACCCATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCGAATTTGGCTCAGATTTATCTGCTTGGTTTCTACGAGGAACGTGAATTTGCCTTATATGTATCTTCTATCTCAAATGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGATAGGCCACATGGTTCGGCTGGTGGTCTTTATCATTTTAGGGATCTGATCATGGAAGAGGATCCGTCACATATCTTCTTGCTGAACTGTGATGTATGCTGCAGTTTTCCACTGCCAGAGATGCTAGATGCTCACAAAAGATATGGTGGGATGGGAACAATACTAGTTGTGAAGGTTTCTGCAGAGTCAGCGAGCGAGTTTGGGGAATTAGTAGCTGATCCAACCACTAATGAACTATTGCATTACACAGAGAAACCTGAAACTTTTGTAAGTGACCGTATAAACTGTGGTGTGTACATATTTACACCAGATATCTTTACAGCCATCGAGGGTGTTTCTACTCAGAGGAAAGACAGAGCTAACCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCAGACACAAGGAGTCTTCCTGCCAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGGAAGAAGCAGTTATACATTTATGAAACCAATGACTTTTGGGAACAAATCAAAACTCCAGGAATGTCCATAAAATGTTCTGGCTTGTATCTTGCCCAATTTCGTTACACATCCCCCCATCTATTAGCAAATGGAGATGGTATTAAGAAAGCCAGCATCATTGGTGATGTTTATATTCACCCATCAGCAAAAGTGCATCCATCTGCAAAGATTGGTCCAAGGGTATCAATATCTGCAAATGCTCGTATAGGTGCTGGTGCAAGGCTCATCAGTTGTATTGTCCTTGACGACGTTGAAATCAAGGCAGGTGTACAGTTAATTGGTTTGAAATGCATAAGTATTTTTGGgactcaattttttaatatttcatcttACAGGAAAATGCTGTTGTTAGTCATGCAATTGTTGGATGGAAATCCGCTATTGGACGATGGGCCCGTGTCCAGgcaagtttcaaaattttaa 1197 0.4094 MVAANERVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLLGFYEEREFALYVSSISNELKVPVRYLKEDRPHGSAGGLYHFRDLIMEEDPSHIFLLNCDVCCSFPLPEMLDAHKRYGGMGTILVVKVSAESASEFGELVADPTTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQPDTRSLPANYVRLDQDILSPLAGKKQLYIYETNDFWEQIKTPGMSIKCSGLYLAQFRYTSPHLLANGDGIKKASIIGDVYIHPSAKVHPSAKIGPRVSISANARIGAGARLISCIVLDDVEIKAGVQLIGLKCISIFGTQFFNISSYRKMLLLVMQLLDGNPLLDDGPVSRQVSKF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2185 398 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 3 348 - -
Ssu1g2185 398 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 344 IPR029044 -
Ssu1g2185 398 Pfam Nucleotidyl transferase 10 211 IPR005835 GO:0009058|GO:0016779
Ssu1g2185 398 Gene3D Hexapeptide repeat proteins 286 361 - -
Ssu1g2185 398 CDD M1P_guanylylT_A_like_N 10 274 - -
Ssu1g2185 398 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 275 IPR029044 -
Ssu1g2185 398 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2185 Ssu-Chr1 62194312 62197880 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2185 K00966 - gmx:100817201 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2185 1 62194312 62197880 Ssu1g2185 1 62194312 62197880 ECH